RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 SMNDC1O75940 238 aaKnown RBP eCLIP20.2■□□□□ 0.823e-8■■■□□ 15.5
SREBF1-214ENST00000486311 NKX2-2O95096 273 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 ANGPTL1O95841 491 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 NEFHP12036 1026 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 GPC1P35052 558 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 KIR2DL2P43627 348 aaPredicted RBP20.2■□□□□ 0.82
SREBF1-214ENST00000486311 CLDN20P56880 219 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 ADAM8P78325 824 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 OCRLQ01968 901 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 FAM27E3Q08E93 113 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 C17orf67Q0P5P2 114 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 GRAMD1BQ3KR37 738 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 VPS26BQ4G0F5 336 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 APOOLQ6UXV4 268 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 BTLAQ7Z6A9 289 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 C4orf33Q8N1A6 199 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 OR2T11Q8NH01 316 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 ZFP28Q8NHY6 868 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 GPR151Q8TDV0 419 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 PIK3R3Q92569 461 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 CIDECQ96AQ7 238 aaPredicted RBP20.2■□□□□ 0.82
SREBF1-214ENST00000486311 PPCDCQ96CD2 204 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 POM121Q96HA1 1249 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 GATA5Q9BWX5 397 aaPredicted RBP20.2■□□□□ 0.82
SREBF1-214ENST00000486311 PINK1Q9BXM7 581 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 IQCGQ9H095 443 aaKnown RBP20.2■□□□□ 0.82
SREBF1-214ENST00000486311 TUBB1Q9H4B7 451 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 REEP4Q9H6H4 257 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 EQTNQ9NQ60 294 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 DLL4Q9NR61 685 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 NTMQ9P121 344 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 AP4B1Q9Y6B7 739 aa20.2■□□□□ 0.82
SREBF1-214ENST00000486311 H3BML4 177 aa20.19■□□□□ 0.82
SREBF1-214ENST00000486311 SDC1P18827 310 aa20.19■□□□□ 0.82
SREBF1-214ENST00000486311 CD79BP40259 229 aa20.19■□□□□ 0.82
SREBF1-214ENST00000486311 FRKP42685 505 aaPredicted RBP20.19■□□□□ 0.82
SREBF1-214ENST00000486311 PDE7AQ13946 482 aa20.19■□□□□ 0.82
SREBF1-214ENST00000486311 PCLAFQ15004 111 aa20.19■□□□□ 0.82
SREBF1-214ENST00000486311 TMEM44Q2T9K0 475 aa20.19■□□□□ 0.82
SREBF1-214ENST00000486311 ZNF385BQ569K4 471 aa20.19■□□□□ 0.82
SREBF1-214ENST00000486311 ZNF474Q6S9Z5 364 aaPredicted RBP20.19■□□□□ 0.82
SREBF1-214ENST00000486311 METTL25Q8N6Q8 603 aa20.19■□□□□ 0.82
SREBF1-214ENST00000486311 CDRT4Q8N9R6 151 aa20.19■□□□□ 0.82
SREBF1-214ENST00000486311 CEP70Q8NHQ1 597 aa20.19■□□□□ 0.82
SREBF1-214ENST00000486311 ZBED6CLQ96FA7 236 aaPredicted RBP20.19■□□□□ 0.82
SREBF1-214ENST00000486311 PGM2Q96G03 612 aa20.19■□□□□ 0.82
SREBF1-214ENST00000486311 TSSK3Q96PN8 268 aa20.19■□□□□ 0.82
SREBF1-214ENST00000486311 RNF122Q9H9V4 155 aa20.19■□□□□ 0.82
SREBF1-214ENST00000486311 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.18■□□□□ 0.82
SREBF1-214ENST00000486311 UQCRHLA0A096LP55 91 aa20.18■□□□□ 0.82
SREBF1-214ENST00000486311 EMC8O43402 210 aa20.18■□□□□ 0.82
SREBF1-214ENST00000486311 AKAP10O43572 662 aa20.18■□□□□ 0.82
SREBF1-214ENST00000486311 TRIM13O60858 407 aa20.18■□□□□ 0.82
SREBF1-214ENST00000486311 NGFRP08138 427 aa20.18■□□□□ 0.82
SREBF1-214ENST00000486311 FOSL1P15407 271 aa20.18■□□□□ 0.82
SREBF1-214ENST00000486311 RPS3AP61247 264 aaKnown RBP20.18■□□□□ 0.82
SREBF1-214ENST00000486311 FGFBP1Q14512 234 aa20.18■□□□□ 0.82
SREBF1-214ENST00000486311 PON3Q15166 354 aa20.18■□□□□ 0.82
SREBF1-214ENST00000486311 RFTN2Q52LD8 501 aaPredicted RBP20.18■□□□□ 0.82
SREBF1-214ENST00000486311 KANK2Q63ZY3 851 aa20.18■□□□□ 0.82
SREBF1-214ENST00000486311 FNDC9Q8TBE3 224 aa20.18■□□□□ 0.82
SREBF1-214ENST00000486311 AENQ8WTP8 325 aaKnown RBP20.18■□□□□ 0.82
SREBF1-214ENST00000486311 CAVIN3Q969G5 261 aa20.18■□□□□ 0.82
SREBF1-214ENST00000486311 GIMAP5Q96F15 307 aa20.18■□□□□ 0.82
SREBF1-214ENST00000486311 ZNF845Q96IR2 970 aaPredicted RBP20.18■□□□□ 0.82
SREBF1-214ENST00000486311 OPN3Q9H1Y3 402 aaPredicted RBP20.18■□□□□ 0.82
SREBF1-214ENST00000486311 HHATLQ9HCP6 504 aa20.18■□□□□ 0.82
SREBF1-214ENST00000486311 ACSS1Q9NUB1 689 aaPredicted RBP20.18■□□□□ 0.82
SREBF1-214ENST00000486311 SH3BP4Q9P0V3 963 aa20.18■□□□□ 0.82
SREBF1-214ENST00000486311 EIF3LQ9Y262 564 aaKnown RBP20.18■□□□□ 0.82
SREBF1-214ENST00000486311 TMED5Q9Y3A6 229 aa20.18■□□□□ 0.82
SREBF1-214ENST00000486311 FIS1Q9Y3D6 152 aa20.18■□□□□ 0.82
SREBF1-214ENST00000486311 DNAJC15Q9Y5T4 150 aa20.18■□□□□ 0.82
SREBF1-214ENST00000486311 ALG1L2C9J202 215 aa20.17■□□□□ 0.82
SREBF1-214ENST00000486311 LSM1O15116 133 aaKnown RBP20.17■□□□□ 0.82
SREBF1-214ENST00000486311 CHEK2O96017 543 aa20.17■□□□□ 0.82
SREBF1-214ENST00000486311 CGAP01215 116 aa20.17■□□□□ 0.82
SREBF1-214ENST00000486311 CD8BP10966 210 aa20.17■□□□□ 0.82
SREBF1-214ENST00000486311 CD53P19397 219 aa20.17■□□□□ 0.82
SREBF1-214ENST00000486311 PRKAG1P54619 331 aa20.17■□□□□ 0.82
SREBF1-214ENST00000486311 MANFP55145 182 aaKnown RBP20.17■□□□□ 0.82
SREBF1-214ENST00000486311 RPL38P63173 70 aaKnown RBP20.17■□□□□ 0.82
SREBF1-214ENST00000486311 SIRPAP78324 504 aa20.17■□□□□ 0.82
SREBF1-214ENST00000486311 GUSBP1Q15486 140 aa20.17■□□□□ 0.82
SREBF1-214ENST00000486311 EXOC3L1Q86VI1 746 aa20.17■□□□□ 0.82
SREBF1-214ENST00000486311 HOMEZQ8IX15 550 aa20.17■□□□□ 0.82
SREBF1-214ENST00000486311 NUP43Q8NFH3 380 aa20.17■□□□□ 0.82
SREBF1-214ENST00000486311 FAM110BQ8TC76 370 aa20.17■□□□□ 0.82
SREBF1-214ENST00000486311 WFIKKN1Q96NZ8 548 aa20.17■□□□□ 0.82
SREBF1-214ENST00000486311 MS4A4EQ96PG1 132 aa20.17■□□□□ 0.82
SREBF1-214ENST00000486311 MKS1Q9NXB0 559 aa20.17■□□□□ 0.82
SREBF1-214ENST00000486311 ELOVL5Q9NYP7 299 aa20.17■□□□□ 0.82
SREBF1-214ENST00000486311 BAIAP2L1Q9UHR4 511 aa20.17■□□□□ 0.82
SREBF1-214ENST00000486311 FLNAP21333 2647 aaKnown RBP20.17■□□□□ 0.82
SREBF1-214ENST00000486311 NIPBLQ6KC79 2804 aaeCLIP20.17■□□□□ 0.82
SREBF1-214ENST00000486311 FGF4P08620 206 aa20.16■□□□□ 0.82
SREBF1-214ENST00000486311 LINC00032P0C843 101 aa20.16■□□□□ 0.82
SREBF1-214ENST00000486311 ACP2P11117 423 aa20.16■□□□□ 0.82
SREBF1-214ENST00000486311 ZNF17P17021 662 aa20.16■□□□□ 0.82
SREBF1-214ENST00000486311 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms