RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 IGLV3-32A0A0A0MS00 114 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 A0A1W2PPM1 405 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 OR2M5A3KFT3 312 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 SMIM23A6NLE4 172 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 FAM171A2A8MVW0 826 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 NDUFB5O43674 189 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 NME6O75414 186 aaPredicted RBP13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 SOX30O94993 753 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 KRT4P19013 534 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 FPR1P21462 350 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 HPCAL1P37235 193 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 SERPINB4P48594 390 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 MANFP55145 182 aaKnown RBP13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 PON3Q15166 354 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 POU4F3Q15319 338 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 PDSS1Q5T2R2 415 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 SHEQ5VZ18 495 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 FAM219BQ5XKK7 198 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 ZCCHC12Q6PEW1 402 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 MARCH3Q86UD3 253 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 WDR75Q8IWA0 830 aaKnown RBP13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 METTL25Q8N6Q8 603 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 SLC9A6Q92581 669 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 PIGTQ969N2 578 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 ZBTB8AQ96BR9 441 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 RNF122Q9H9V4 155 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 SH3BP4Q9P0V3 963 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 MCTS1Q9ULC4 181 aaKnown RBP13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 ZNF337Q9Y3M9 751 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 EXPH5Q8NEV8 1989 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 ITPR3Q14573 2671 aa13.03□□□□□ -0.32
SMARCE1-209ENST00000478349 ALG1L2C9J202 215 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 C16orf97H3BN30 126 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 TRIM13O60858 407 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 DIAPH2O60879 1101 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 NKX2-2O95096 273 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 SYNGR4O95473 234 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 KRT16P08779 473 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 ALOX5P09917 674 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 PPP3CBP16298 524 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 PRIM2P49643 509 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 PRKAG1P54619 331 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 CTBP2P56545 445 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 RPL38P63173 70 aaKnown RBP13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 SIRPAP78324 504 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 ADAM8P78325 824 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 CLEC6AQ6EIG7 209 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 PPP4R4Q6NUP7 873 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 FAM214BQ7L5A3 538 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 ZNF551Q7Z340 670 aaPredicted RBP13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 BIVMQ86UB2 503 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 DDIASQ8IXT1 998 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 RIBC1Q8N443 379 aaPredicted RBP13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 NATD1Q8N6N6 113 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 FNDC9Q8TBE3 224 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 STARD4Q96DR4 205 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 GLRX2Q9NS18 164 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 ATAD3AQ9NVI7 634 aa13.02□□□□□ -0.33
SMARCE1-209ENST00000478349 C7orf72A4D263 438 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 H3BNH8 94 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 SCDO00767 359 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 EIF1AYO14602 144 aaKnown RBP13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 CTIFO43310 598 aaKnown RBP13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 PABPC4LP0CB38 370 aaKnown RBP13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 SDC1P18827 310 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 UGT2B10P36537 528 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 CLDN15P56746 228 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 KIAA0040Q15053 153 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 GRAMD1BQ3KR37 738 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 GTF2IRD2BQ6EKJ0 949 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 VWA1Q6PCB0 445 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 PLXDC2Q6UX71 529 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 GTF2IRD2Q86UP8 949 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 STK32CQ86UX6 486 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 P3H2Q8IVL5 708 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 COX18Q8N8Q8 333 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 ZNF527Q8NB42 609 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 NUP43Q8NFH3 380 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 OR6K3Q8NGY3 331 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 ACTRT2Q8TDY3 377 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 FIG4Q92562 907 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 JADE3Q92613 823 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 CHMP6Q96FZ7 201 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 GMPPAQ96IJ6 420 aaPredicted RBP13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 PPP3R2Q96LZ3 170 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 TSSK3Q96PN8 268 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 PIP5K1AQ99755 562 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 UBQLN4Q9NRR5 601 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 MKS1Q9NXB0 559 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 NTMQ9P121 344 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 FIS1Q9Y3D6 152 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 CCL27Q9Y4X3 112 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 MED13LQ71F56 2210 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 ABCA4P78363 2273 aa13.01□□□□□ -0.33
SMARCE1-209ENST00000478349 NF1P21359 2839 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 AKAP10O43572 662 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 SMPD2O60906 423 aa13□□□□□ -0.33
SMARCE1-209ENST00000478349 OXSR1O95747 527 aaPredicted RBP13□□□□□ -0.33
SMARCE1-209ENST00000478349 CD53P19397 219 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms