RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	LINC01387	J3KSC0	135 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	SOX30	O94993	753 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	KCNK2	O95069	426 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	RCBTB2	O95199	551 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	ANGPTL1	O95841	491 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	IL18BP	O95998	194 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	HMGN2	P05204	90 aa	Known RBP	12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	DHRS4L1	P0CG22	281 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	TMIGD3	P0DMS9	266 aa	Predicted RBP	12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	PEPD	P12955	493 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	UQCRC1	P31930	480 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	SLC1A6	P48664	564 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	CCT3	P49368	545 aa	Known RBP	12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	RPL14	P50914	215 aa	Known RBP	12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	DIO3	P55073	304 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	KRTAP10-9	P60411	292 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	PDCD2	Q16342	344 aa	Predicted RBP	12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	DUSP5	Q16690	384 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	SMU1	Q2TAY7	513 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	GRAMD1B	Q3KR37	738 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	POMZP3	Q6PJE2	187 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	CHMP1B	Q7LBR1	199 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	ADGRE4P	Q86SQ3	457 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	KRTCAP2	Q8N6L1	136 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	ZNF781	Q8N8C0	355 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	C9orf106	Q8NAJ2	232 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	GOT1L1	Q8NHS2	421 aa	Predicted RBP	12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	FBXO30	Q8TB52	745 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	FAM110B	Q8TC76	370 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	JADE3	Q92613	823 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	RNASE6	Q93091	150 aa	Known RBP	12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	WNT2B	Q93097	391 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	ZBTB9	Q96C00	473 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	COQ8B	Q96D53	544 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	CHMP6	Q96FZ7	201 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	C16orf58	Q96GQ5	468 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	PPP1R36	Q96LQ0	422 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	SH3GL2	Q99962	352 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	PAIP2	Q9BPZ3	127 aa	Known RBP	12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	YIPF4	Q9BSR8	244 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	G6PC3	Q9BUM1	346 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	BHLHE41	Q9C0J9	482 aa	Predicted RBP	12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	ACBD3	Q9H3P7	528 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	ZNF395	Q9H8N7	513 aa	Predicted RBP	12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	GIN1	Q9NXP7	522 aa		12.5	□□□□□ -0.41
HDAC7-222	ENST00000477937	PDZD2	O15018	2839 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	ALG1L2	C9J202	215 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	CFLAR	O15519	480 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	NDUFB5	O43674	189 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	OXSR1	O95747	527 aa	Predicted RBP	12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	NGFR	P08138	427 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	G6PD	P11413	515 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	HPGD	P15428	266 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	ZNF708	P17019	499 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	TBXA2R	P21731	343 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	LCN1	P31025	176 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	AGFG1	P52594	562 aa	Known RBP	12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	CLDN8	P56748	225 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	CLDN18	P56856	261 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	B3GALT5-AS1	P59052	145 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	STX3	Q13277	289 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	MPP2	Q14168	576 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	LASP1	Q14847	261 aa	Known RBP	12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	FBXL19-AS1	Q494R0	122 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	GLYR1	Q49A26	553 aa	Predicted RBP	12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	RAET1L	Q5VY80	246 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	FIGNL1	Q6PIW4	674 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	APOOL	Q6UXV4	268 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	GALNT10	Q86SR1	603 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	RIMKLA	Q8IXN7	391 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	COX18	Q8N8Q8	333 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	OR4C3	Q8NH37	302 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	PSMA8	Q8TAA3	256 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	C1GALT1C1	Q96EU7	318 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	STAC	Q99469	402 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	PIGQ	Q9BRB3	760 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	DUSP26	Q9BV47	211 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	BTBD2	Q9BX70	525 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	C20orf27	Q9GZN8	174 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	PIGU	Q9H490	435 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	AKTIP	Q9H8T0	292 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	DUSP22	Q9NRW4	184 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	ASIC5	Q9NY37	505 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	CLCF1	Q9UBD9	225 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	FAF1	Q9UNN5	650 aa	Predicted RBP	12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	L3MBTL1	Q9Y468	752 aa		12.49	□□□□□ -0.41
HDAC7-222	ENST00000477937	IGLV3-32	A0A0A0MS00	114 aa		12.48	□□□□□ -0.41
HDAC7-222	ENST00000477937	EEF1E1-BLOC1S5	C9J1V9	151 aa		12.48	□□□□□ -0.41
HDAC7-222	ENST00000477937	EEF1E1	O43324	174 aa	Known RBP	12.48	□□□□□ -0.41
HDAC7-222	ENST00000477937	ERLIN1	O75477	346 aa		12.48	□□□□□ -0.41
HDAC7-222	ENST00000477937	C6orf47	O95873	294 aa		12.48	□□□□□ -0.41
HDAC7-222	ENST00000477937	POU3F2	P20265	443 aa	Predicted RBP	12.48	□□□□□ -0.41
HDAC7-222	ENST00000477937	BGN	P21810	368 aa		12.48	□□□□□ -0.41
HDAC7-222	ENST00000477937	KIR2DL3	P43628	341 aa		12.48	□□□□□ -0.41
HDAC7-222	ENST00000477937	EEFSEC	P57772	596 aa	Known RBP	12.48	□□□□□ -0.41
HDAC7-222	ENST00000477937	C21orf58	P58505	322 aa		12.48	□□□□□ -0.41
HDAC7-222	ENST00000477937	EEF1A1	P68104	462 aa	Known RBP	12.48	□□□□□ -0.41
HDAC7-222	ENST00000477937	POU6F2	P78424	691 aa	Predicted RBP	12.48	□□□□□ -0.41
HDAC7-222	ENST00000477937	TP53BP2	Q13625	1128 aa		12.48	□□□□□ -0.41

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