RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-210	ENST00000477625	JADE3	Q92613	823 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	C14orf79	Q96F83	325 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	STAC	Q99469	402 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	YIPF4	Q9BSR8	244 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	G6PC3	Q9BUM1	346 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	DUSP26	Q9BV47	211 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	NUF2	Q9BZD4	464 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	PIGU	Q9H490	435 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	CXorf36	Q9H7Y0	433 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	PTGES2	Q9H7Z7	377 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	NEUROD4	Q9HD90	331 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	DUSP22	Q9NRW4	184 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	PNPO	Q9NVS9	261 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	CREBBP	Q92793	2442 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	MED12	Q93074	2177 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	IGLV3-32	A0A0A0MS00	114 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	MBD3L4	A6NDZ8	208 aa	Predicted RBP	11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	MBD3L3	A6NE82	208 aa	Predicted RBP	11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	MBD3L5	A6NJ08	208 aa	Predicted RBP	11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	ALG1L2	C9J202	215 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625		H0Y3Z8	333 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	SYT5	O00445	386 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	DVL2	O14641	736 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	CFLAR	O15519	480 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	SOX30	O94993	753 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	ANGPTL1	O95841	491 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	NGFR	P08138	427 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	HK1	P19367	917 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	TBXA2R	P21731	343 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	BMP5	P22003	454 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	TCEA1	P23193	301 aa	Known RBP	11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	LCN1	P31025	176 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	LHX2	P50458	406 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	B3GALT5-AS1	P59052	145 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	MAGOH	P61326	146 aa	Known RBP	11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	GANAB	Q14697	944 aa	Known RBP	11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	LASP1	Q14847	261 aa	Known RBP	11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	SPDYE7P	Q495Y7	208 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	POMZP3	Q6PJE2	187 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	ADGRE4P	Q86SQ3	457 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	GALNT10	Q86SR1	603 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	DMRTC2	Q8IXT2	367 aa	Predicted RBP	11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	COX18	Q8N8Q8	333 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	OR56A1	Q8NGH5	318 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	MGARP	Q8TDB4	240 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	MOAP1	Q96BY2	351 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	OTUB1	Q96FW1	271 aa	Predicted RBP	11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	UCN2	Q96RP3	112 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	TUBA1C	Q9BQE3	449 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	BTBD2	Q9BX70	525 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	ACTRT3	Q9BYD9	372 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	MEAF6	Q9HAF1	191 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	TMBIM4	Q9HC24	238 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	HHATL	Q9HCP6	504 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	UBQLN4	Q9NRR5	601 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	THAP1	Q9NVV9	213 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	GPATCH2	Q9NW75	528 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	FBXO34	Q9NWN3	711 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	FAF1	Q9UNN5	650 aa	Predicted RBP	11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	FBN2	P35556	2912 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	DCHS2	Q6V1P9	2916 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	HCFC1	P51610	2035 aa		11.09	□□□□□ -0.63
PTPN7-210	ENST00000477625	LINC01387	J3KSC0	135 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	RNASET2	O00584	256 aa	Known RBP	11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	NDUFB5	O43674	189 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	SNN	O75324	88 aa	Predicted RBP	11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	OXSR1	O95747	527 aa	Predicted RBP	11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	KRT16	P08779	473 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	HPGD	P15428	266 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	ZNF708	P17019	499 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	LBP	P18428	481 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	ZNF136	P52737	540 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	CLDN18	P56856	261 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	HBA1	P69905	142 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	POU6F2	P78424	691 aa	Predicted RBP	11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	TP53BP2	Q13625	1128 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	GLYR1	Q49A26	553 aa	Predicted RBP	11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	CCNJ	Q5T5M9	372 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	CDC73	Q6P1J9	531 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	BHLHB9	Q6PI77	547 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	ZAR1	Q86SH2	424 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	RELL2	Q8NC24	303 aa	Predicted RBP	11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	OR8J2	Q8NGG1	315 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	GOT1L1	Q8NHS2	421 aa	Predicted RBP	11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	SFXN5	Q8TD22	340 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	ADAMTS15	Q8TE58	950 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	CDS1	Q92903	461 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	WNT2B	Q93097	391 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	TLCD1	Q96CP7	247 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	C1GALT1C1	Q96EU7	318 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	CHMP6	Q96FZ7	201 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	DPY30	Q9C005	99 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	SLC24A3	Q9HC58	644 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	NKIRAS1	Q9NYS0	192 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	ARHGAP21	Q5T5U3	1957 aa		11.08	□□□□□ -0.64
PTPN7-210	ENST00000477625	INTS1	Q8N201	2190 aa	Known RBP	11.07	□□□□□ -0.64
PTPN7-210	ENST00000477625	CLCA1	A8K7I4	914 aa		11.07	□□□□□ -0.64
PTPN7-210	ENST00000477625	SCD	O00767	359 aa		11.07	□□□□□ -0.64
PTPN7-210	ENST00000477625	ANKRD28	O15084	1053 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms