RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 MAP2K3P46734 347 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 ZFP36L2P47974 494 aaKnown RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 ITGA1P56199 1179 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 NKPD1Q17RQ9 610 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 LYPLAL1Q5VWZ2 237 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 OLFML2AQ68BL7 652 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 TMEM215Q68D42 235 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 LAIR2Q6ISS4 152 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 KANSL1Q7Z3B3 1105 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 RDH10Q8IZV5 341 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 TBC1D19Q8N5T2 526 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 OR4M2Q8NGB6 313 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 OR13C2Q8NGS9 318 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 DYNC2LI1Q8TCX1 351 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 FAM46BQ96A09 425 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 PKMYT1Q99640 499 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 EFCAB11Q9BUY7 163 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 MND1Q9BWT6 205 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 NRSN2Q9GZP1 204 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 LMAN2LQ9H0V9 348 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 KCNN2Q9H2S1 579 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 UBE2ZQ9H832 354 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 MBNL1Q9NR56 388 aaKnown RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 THSD1Q9NS62 852 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 RDH8Q9NYR8 311 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 PSORS1C1Q9UIG5 152 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 BTNL2Q9UIR0 455 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 MGAT4AQ9UM21 535 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 FLVCR2Q9UPI3 526 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 DOPEY2Q9Y3R5 2298 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 A0A1W2PQU0 124 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 GAPDHSO14556 408 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 CACNG3O60359 315 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 MOSPD3O75425 235 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 C1orf105O95561 183 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 F13BP05160 661 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 CHRNB1P11230 501 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 CSNK2A2P19784 350 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 S100A1P23297 94 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 ACADLP28330 430 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 TGFBR2P37173 567 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 MLLT3P42568 568 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 RPL26P61254 145 aaKnown RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 ERVK-21P61565 698 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 KIAA1211LQ6NV74 962 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 SYNPOQ8N3V7 929 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 RERGQ96A58 199 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 RGMAQ96B86 450 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF775Q96BV0 537 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 MRPL38Q96DV4 380 aaKnown RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 RBM18Q96H35 190 aaKnown RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 MROQ9BYG7 248 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 SLIRPQ9GZT3 109 aaKnown RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 ISG20L2Q9H9L3 353 aaKnown RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 GPN2Q9H9Y4 310 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 NECTIN3Q9NQS3 549 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 SPHK1Q9NYA1 384 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 TAAR2Q9P1P5 351 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 METTL15A6NJ78 407 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 C1QTNF3-AMACRE9PGA6 284 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 SGK494L7N484 410 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 PEX12O00623 359 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 PRNPP04156 253 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 HSD3B1P14060 373 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 PTX3P26022 381 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 DDX6P26196 483 aaKnown RBP eCLIP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 HOXD11P31277 338 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 GNALP38405 381 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 TSPAN5P62079 268 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 DSG2Q14126 1118 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 GAS6Q14393 721 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 IRF3Q14653 427 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 KIAA0040Q15053 153 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 RAB30Q15771 203 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 PRRT3Q5FWE3 981 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 PLEKHS1Q5SXH7 462 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 PXDC1Q5TGL8 231 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 C1orf94Q6P1W5 598 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 CXXC5Q7LFL8 322 aaKnown RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 OAFQ86UD1 273 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF683Q8IZ20 524 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 POMGNT2Q8NAT1 580 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 OR2T35Q8NGX2 323 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 PFN4Q8NHR9 129 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 NPRL2Q8WTW4 380 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 APH1BQ8WW43 257 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 EFHD2Q96C19 240 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 PEX11GQ96HA9 241 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 TUBA1CQ9BQE3 449 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 FAM124BQ9H5Z6 455 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-204ENST00000476379 C3orf14Q9HBI5 128 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 ACER3Q9NUN7 267 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 C14orf105Q9NVL8 296 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 TMPRSS11EQ9UL52 423 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 CORO2BQ9UQ03 480 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 WDR37Q9Y2I8 494 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 CHST2Q9Y4C5 530 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 FKBP7Q9Y680 259 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 SLCO1B1Q9Y6L6 691 aa4.68□□□□□ -1.66
CCDC39-204ENST00000476379 PIAS3Q9Y6X2 628 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms