RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 OR51Q1Q8NH59 317 aa20.21■□□□□ 0.83
CCM2-206ENST00000474617 ELF4Q99607 663 aaPredicted RBP20.21■□□□□ 0.83
CCM2-206ENST00000474617 CUTCQ9NTM9 273 aa20.21■□□□□ 0.83
CCM2-206ENST00000474617 UCKL1Q9NWZ5 548 aa20.21■□□□□ 0.83
CCM2-206ENST00000474617 GPR83Q9NYM4 423 aa20.21■□□□□ 0.83
CCM2-206ENST00000474617 M0R3G1 203 aa20.2■□□□□ 0.82
CCM2-206ENST00000474617 KLF4O43474 513 aa20.2■□□□□ 0.82
CCM2-206ENST00000474617 OR2B3O76000 313 aa20.2■□□□□ 0.82
CCM2-206ENST00000474617 SOX14O95416 240 aa20.2■□□□□ 0.82
CCM2-206ENST00000474617 CALRP27797 417 aaKnown RBP20.2■□□□□ 0.82
CCM2-206ENST00000474617 CD1CP29017 333 aa20.2■□□□□ 0.82
CCM2-206ENST00000474617 LCN1P31025 176 aa20.2■□□□□ 0.82
CCM2-206ENST00000474617 RHAGQ02094 409 aa20.2■□□□□ 0.82
CCM2-206ENST00000474617 SQSTM1Q13501 440 aa20.2■□□□□ 0.82
CCM2-206ENST00000474617 ZNF141Q15928 474 aa20.2■□□□□ 0.82
CCM2-206ENST00000474617 MOGQ16653 247 aa20.2■□□□□ 0.82
CCM2-206ENST00000474617 TIGD6Q17RP2 521 aa20.2■□□□□ 0.82
CCM2-206ENST00000474617 KLHL22Q53GT1 634 aa20.2■□□□□ 0.82
CCM2-206ENST00000474617 LYSMD4Q5XG99 296 aa20.2■□□□□ 0.82
CCM2-206ENST00000474617 WDR36Q8NI36 951 aaKnown RBP20.2■□□□□ 0.82
CCM2-206ENST00000474617 PIK3R3Q92569 461 aa20.2■□□□□ 0.82
CCM2-206ENST00000474617 TMEM80Q96HE8 168 aa20.2■□□□□ 0.82
CCM2-206ENST00000474617 SLC41A2Q96JW4 573 aa20.2■□□□□ 0.82
CCM2-206ENST00000474617 TRIM2Q9C040 744 aa20.2■□□□□ 0.82
CCM2-206ENST00000474617 TMEM27Q9HBJ8 222 aa20.2■□□□□ 0.82
CCM2-206ENST00000474617 PLGRKTQ9HBL7 147 aa20.2■□□□□ 0.82
CCM2-206ENST00000474617 MRPS18AQ9NVS2 196 aaKnown RBP20.2■□□□□ 0.82
CCM2-206ENST00000474617 IL20Q9NYY1 176 aa20.2■□□□□ 0.82
CCM2-206ENST00000474617 HTR3EA5X5Y0 456 aa20.19■□□□□ 0.82
CCM2-206ENST00000474617 TMEM150CB9EJG8 249 aa20.19■□□□□ 0.82
CCM2-206ENST00000474617 CLPXO76031 633 aa20.19■□□□□ 0.82
CCM2-206ENST00000474617 HMGN1P05114 100 aa20.19■□□□□ 0.82
CCM2-206ENST00000474617 CSTF2P33240 577 aaKnown RBP eCLIP20.19■□□□□ 0.82
CCM2-206ENST00000474617 EFNB1P98172 346 aa20.19■□□□□ 0.82
CCM2-206ENST00000474617 PSG6Q00889 435 aa20.19■□□□□ 0.82
CCM2-206ENST00000474617 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.19■□□□□ 0.82
CCM2-206ENST00000474617 QSOX2Q6ZRP7 698 aa20.19■□□□□ 0.82
CCM2-206ENST00000474617 ZNF550Q7Z398 422 aa20.19■□□□□ 0.82
CCM2-206ENST00000474617 WDR5BQ86VZ2 330 aa20.19■□□□□ 0.82
CCM2-206ENST00000474617 GPR135Q8IZ08 494 aa20.19■□□□□ 0.82
CCM2-206ENST00000474617 CDK20Q8IZL9 346 aa20.19■□□□□ 0.82
CCM2-206ENST00000474617 RFKQ969G6 155 aa20.19■□□□□ 0.82
CCM2-206ENST00000474617 GUCD1Q96NT3 240 aa20.19■□□□□ 0.82
CCM2-206ENST00000474617 HOXD1Q9GZZ0 328 aa20.19■□□□□ 0.82
CCM2-206ENST00000474617 PALMDQ9NP74 551 aa20.19■□□□□ 0.82
CCM2-206ENST00000474617 SPAG17Q6Q759 2223 aa20.18■□□□□ 0.82
CCM2-206ENST00000474617 SDC3O75056 442 aa20.18■□□□□ 0.82
CCM2-206ENST00000474617 ENTPD6O75354 484 aa20.18■□□□□ 0.82
CCM2-206ENST00000474617 STSP08842 583 aa20.18■□□□□ 0.82
CCM2-206ENST00000474617 CD36P16671 472 aa20.18■□□□□ 0.82
CCM2-206ENST00000474617 C21orf33P30042 268 aaPredicted RBP20.18■□□□□ 0.82
CCM2-206ENST00000474617 RBM34P42696 430 aaKnown RBP20.18■□□□□ 0.82
CCM2-206ENST00000474617 NUDT6P53370 316 aa20.18■□□□□ 0.82
CCM2-206ENST00000474617 PSPHP78330 225 aa20.18■□□□□ 0.82
CCM2-206ENST00000474617 DSG2Q14126 1118 aa20.18■□□□□ 0.82
CCM2-206ENST00000474617 DGUOKQ16854 277 aa20.18■□□□□ 0.82
CCM2-206ENST00000474617 CCNJQ5T5M9 372 aa20.18■□□□□ 0.82
CCM2-206ENST00000474617 ZNF440Q8IYI8 595 aa20.18■□□□□ 0.82
CCM2-206ENST00000474617 SIMC1Q8NDZ2 872 aa20.18■□□□□ 0.82
CCM2-206ENST00000474617 TMEM163Q8TC26 289 aa20.18■□□□□ 0.82
CCM2-206ENST00000474617 GAB3Q8WWW8 586 aa20.18■□□□□ 0.82
CCM2-206ENST00000474617 DPYSL5Q9BPU6 564 aa20.18■□□□□ 0.82
CCM2-206ENST00000474617 RHNO1Q9BSD3 238 aa20.18■□□□□ 0.82
CCM2-206ENST00000474617 SERTAD3Q9UJW9 196 aa20.18■□□□□ 0.82
CCM2-206ENST00000474617 ERGIC3Q9Y282 383 aa20.18■□□□□ 0.82
CCM2-206ENST00000474617 CDH10Q9Y6N8 788 aa20.18■□□□□ 0.82
CCM2-206ENST00000474617 A0A1B0GVT2 93 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 H3BMH7 237 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 MED26O95402 600 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 CTSBP07858 339 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 ADORA3P0DMS8 318 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 UGT2B10P36537 528 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 MAPK14Q16539 360 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 PRICKLE2Q7Z3G6 844 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 HMGN2P46Q86SG4 172 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 SLITRK4Q8IW52 837 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 SLC35F3Q8IY50 421 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 SLC25A45Q8N413 288 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 TCEANCQ8N8B7 351 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 ART5Q96L15 291 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 CCNL2Q96S94 520 aaPredicted RBP20.17■□□□□ 0.82
CCM2-206ENST00000474617 NDC1Q9BTX1 674 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 TVP23BQ9NYZ1 205 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 MRTO4Q9UKD2 239 aaKnown RBP20.17■□□□□ 0.82
CCM2-206ENST00000474617 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.17■□□□□ 0.82
CCM2-206ENST00000474617 SLC7A7Q9UM01 511 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 CLDN16Q9Y5I7 305 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 PRODHO43272 600 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 FRS3O43559 492 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 LCKP06239 509 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 ZNF182P17025 639 aaPredicted RBP20.17■□□□□ 0.82
CCM2-206ENST00000474617 GCGRP47871 477 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 OR1D5P58170 312 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 ZNF267Q14586 743 aaPredicted RBP20.17■□□□□ 0.82
CCM2-206ENST00000474617 OR1Q1Q15612 314 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 SNAPC1Q16533 368 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 FIGNL1Q6PIW4 674 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 SLC46A3Q7Z3Q1 461 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 NLGN4XQ8N0W4 816 aa20.17■□□□□ 0.82
CCM2-206ENST00000474617 LSMEM1Q8N8F7 131 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms