RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, human

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKS1B-206	ENST00000474215	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	10.14	□□□□□ -0.79
CKS1B-206	ENST00000474215	FBXO30	Q8TB52	745 aa		10.14	□□□□□ -0.79
CKS1B-206	ENST00000474215	PPP1R36	Q96LQ0	422 aa		10.14	□□□□□ -0.79
CKS1B-206	ENST00000474215	SFXN2	Q96NB2	322 aa		10.14	□□□□□ -0.79
CKS1B-206	ENST00000474215	TUBA1C	Q9BQE3	449 aa		10.14	□□□□□ -0.79
CKS1B-206	ENST00000474215	YIPF4	Q9BSR8	244 aa		10.14	□□□□□ -0.79
CKS1B-206	ENST00000474215	DUSP26	Q9BV47	211 aa		10.14	□□□□□ -0.79
CKS1B-206	ENST00000474215	BHLHE41	Q9C0J9	482 aa	Predicted RBP	10.14	□□□□□ -0.79
CKS1B-206	ENST00000474215	SLC24A3	Q9HC58	644 aa		10.14	□□□□□ -0.79
CKS1B-206	ENST00000474215	HHATL	Q9HCP6	504 aa		10.14	□□□□□ -0.79
CKS1B-206	ENST00000474215	GIN1	Q9NXP7	522 aa		10.14	□□□□□ -0.79
CKS1B-206	ENST00000474215	RPH3A	Q9Y2J0	694 aa	Predicted RBP	10.14	□□□□□ -0.79
CKS1B-206	ENST00000474215	PDZD2	O15018	2839 aa		10.14	□□□□□ -0.79
CKS1B-206	ENST00000474215	ABCA12	Q86UK0	2595 aa		10.14	□□□□□ -0.79
CKS1B-206	ENST00000474215	IGLV3-32	A0A0A0MS00	114 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	TMEM120B	A0PK00	339 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	SYT5	O00445	386 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	CFLAR	O15519	480 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	SOX30	O94993	753 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	C6orf47	O95873	294 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	ZNF708	P17019	499 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	HK1	P19367	917 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	BMP5	P22003	454 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	TCEA1	P23193	301 aa	Known RBP	10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	CTSS	P25774	331 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	LCN1	P31025	176 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	SLC18A1	P54219	525 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	DLX5	P56178	289 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	CLDN18	P56856	261 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	WDR4	P57081	412 aa	Known RBP	10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	TLE4	Q04727	773 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	BST1	Q10588	318 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	GANAB	Q14697	944 aa	Known RBP	10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	SPDYE7P	Q495Y7	208 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	GLYR1	Q49A26	553 aa	Predicted RBP	10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	BEND6	Q5SZJ8	279 aa	Predicted RBP	10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	FIGNL1	Q6PIW4	674 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	CAMKMT	Q7Z624	323 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	ADGRE4P	Q86SQ3	457 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	GALNT10	Q86SR1	603 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	COX18	Q8N8Q8	333 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	OR56A1	Q8NGH5	318 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	GOT1L1	Q8NHS2	421 aa	Predicted RBP	10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	JADE3	Q92613	823 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	WNT2B	Q93097	391 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	MOAP1	Q96BY2	351 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	C1GALT1C1	Q96EU7	318 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	CHMP6	Q96FZ7	201 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	LURAP1	Q96LR2	239 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	UCN2	Q96RP3	112 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	STAC	Q99469	402 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	TM9SF2	Q99805	663 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	G6PC3	Q9BUM1	346 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	BTBD2	Q9BX70	525 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	ACTRT3	Q9BYD9	372 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	PIGU	Q9H490	435 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	CXorf36	Q9H7Y0	433 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	UBQLN4	Q9NRR5	601 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	DUSP22	Q9NRW4	184 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	PNPO	Q9NVS9	261 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	FBXO34	Q9NWN3	711 aa		10.13	□□□□□ -0.79
CKS1B-206	ENST00000474215	CLCA1	A8K7I4	914 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	ALG1L2	C9J202	215 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	LINC01387	J3KSC0	135 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	NDUFB5	O43674	189 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	OXSR1	O95747	527 aa	Predicted RBP	10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	KRT16	P08779	473 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	PEPD	P12955	493 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	HPGD	P15428	266 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	LBP	P18428	481 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	OPRM1	P35372	400 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	ZNF136	P52737	540 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	DGKQ	P52824	942 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	MAGOH	P61326	146 aa	Known RBP	10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	HBA1	P69905	142 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	POU6F2	P78424	691 aa	Predicted RBP	10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	TP53BP2	Q13625	1128 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	LASP1	Q14847	261 aa	Known RBP	10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	CCNJ	Q5T5M9	372 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	RAET1L	Q5VY80	246 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	CDC73	Q6P1J9	531 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	ARSK	Q6UWY0	536 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	ZAR1	Q86SH2	424 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	LRRC34	Q8IZ02	419 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	C9orf106	Q8NAJ2	232 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	RELL2	Q8NC24	303 aa	Predicted RBP	10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	SFXN5	Q8TD22	340 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	CDS1	Q92903	461 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	LRRC46	Q96FV0	321 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	OTUB1	Q96FW1	271 aa	Predicted RBP	10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	PIGQ	Q9BRB3	760 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	NUF2	Q9BZD4	464 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	DPY30	Q9C005	99 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	MEAF6	Q9HAF1	191 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	TMBIM4	Q9HC24	238 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	MCCC2	Q9HCC0	563 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	NEUROD4	Q9HD90	331 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	THAP1	Q9NVV9	213 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	GPATCH2	Q9NW75	528 aa		10.12	□□□□□ -0.79
CKS1B-206	ENST00000474215	KCNN3	Q9UGI6	736 aa		10.12	□□□□□ -0.79

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