RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 HUS1BQ8NHY5 278 aa9.24□□□□□ -0.93
SSBP1-209ENST00000473783 ABHD3Q8WU67 409 aa9.24□□□□□ -0.93
SSBP1-209ENST00000473783 SNX18Q96RF0 628 aa9.24□□□□□ -0.93
SSBP1-209ENST00000473783 PKP2Q99959 881 aa9.24□□□□□ -0.93
SSBP1-209ENST00000473783 LACRTQ9GZZ8 138 aa9.24□□□□□ -0.93
SSBP1-209ENST00000473783 FKRPQ9H9S5 495 aa9.24□□□□□ -0.93
SSBP1-209ENST00000473783 TSC22D4Q9Y3Q8 395 aa9.24□□□□□ -0.93
SSBP1-209ENST00000473783 TNFSF11O14788 317 aa9.23□□□□□ -0.93
SSBP1-209ENST00000473783 IPO7O95373 1038 aaKnown RBP9.23□□□□□ -0.93
SSBP1-209ENST00000473783 STAMBPO95630 424 aa9.23□□□□□ -0.93
SSBP1-209ENST00000473783 CT45A8P0DMV1 189 aa9.23□□□□□ -0.93
SSBP1-209ENST00000473783 CT45A9P0DMV2 189 aa9.23□□□□□ -0.93
SSBP1-209ENST00000473783 PGAM1P18669 254 aa9.23□□□□□ -0.93
SSBP1-209ENST00000473783 PTX3P26022 381 aaPredicted RBP9.23□□□□□ -0.93
SSBP1-209ENST00000473783 ZFP36P26651 326 aaKnown RBP9.23□□□□□ -0.93
SSBP1-209ENST00000473783 OR3A2P47893 321 aa9.23□□□□□ -0.93
SSBP1-209ENST00000473783 SNRPD2P62316 118 aaKnown RBP9.23□□□□□ -0.93
SSBP1-209ENST00000473783 RAC1P63000 192 aa9.23□□□□□ -0.93
SSBP1-209ENST00000473783 PHC1P78364 1004 aa9.23□□□□□ -0.93
SSBP1-209ENST00000473783 STX5Q13190 355 aa9.23□□□□□ -0.93
SSBP1-209ENST00000473783 CUL3Q13618 768 aa9.23□□□□□ -0.93
SSBP1-209ENST00000473783 ZNF239Q16600 458 aaKnown RBP9.23□□□□□ -0.93
SSBP1-209ENST00000473783 CT45A2Q5DJT8 189 aa9.23□□□□□ -0.93
SSBP1-209ENST00000473783 HBMQ6B0K9 141 aa9.23□□□□□ -0.93
SSBP1-209ENST00000473783 SULT1C3Q6IMI6 304 aa9.23□□□□□ -0.93
SSBP1-209ENST00000473783 GRHL2Q6ISB3 625 aa9.23□□□□□ -0.93
SSBP1-209ENST00000473783 LRRC70Q7Z2Q7 622 aa9.23□□□□□ -0.93
SSBP1-209ENST00000473783 RNF175Q8N4F7 328 aa9.23□□□□□ -0.93
SSBP1-209ENST00000473783 UHMK1Q8TAS1 419 aaKnown RBP9.23□□□□□ -0.93
SSBP1-209ENST00000473783 FBF1Q8TES7 1133 aa9.23□□□□□ -0.93
SSBP1-209ENST00000473783 ESAMQ96AP7 390 aa9.23□□□□□ -0.93
SSBP1-209ENST00000473783 EFHD2Q96C19 240 aaPredicted RBP9.23□□□□□ -0.93
SSBP1-209ENST00000473783 SIGLEC10Q96LC7 697 aa9.23□□□□□ -0.93
SSBP1-209ENST00000473783 MTERF1Q99551 399 aaKnown RBP9.23□□□□□ -0.93
SSBP1-209ENST00000473783 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.23□□□□□ -0.93
SSBP1-209ENST00000473783 GRIP1Q9Y3R0 1128 aa9.23□□□□□ -0.93
SSBP1-209ENST00000473783 ATP23Q9Y6H3 246 aa9.23□□□□□ -0.93
SSBP1-209ENST00000473783 A0A0J9YW62 118 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 POM121CA8CG34 1229 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 SHISA8B8ZZ34 492 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 FADS1O60427 444 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 CCNT2O60583 730 aaKnown RBP9.22□□□□□ -0.93
SSBP1-209ENST00000473783 BCAS2O75934 225 aaPredicted RBP9.22□□□□□ -0.93
SSBP1-209ENST00000473783 TTC4O95801 387 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 YES1P07947 543 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 CSNK2A2P19784 350 aaPredicted RBP9.22□□□□□ -0.93
SSBP1-209ENST00000473783 ME2P23368 584 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 ZNF83P51522 516 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 CORO7P57737 925 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 GPX6P59796 221 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 UBA52P62987 128 aaKnown RBP9.22□□□□□ -0.93
SSBP1-209ENST00000473783 PHEXP78562 749 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 MST1LQ2TV78 715 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 TRMT12Q53H54 448 aaKnown RBP9.22□□□□□ -0.93
SSBP1-209ENST00000473783 LCE2DQ5TA82 110 aaPredicted RBP9.22□□□□□ -0.93
SSBP1-209ENST00000473783 SLC46A3Q7Z3Q1 461 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 TXLNBQ8N3L3 684 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 GTPBP8Q8N3Z3 284 aaPredicted RBP9.22□□□□□ -0.93
SSBP1-209ENST00000473783 SPATA6LQ8N4H0 392 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 ANKS4BQ8N8V4 417 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 ZDHHC22Q8N966 263 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 FAM110BQ8TC76 370 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 OSTF1Q92882 214 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 CPNE4Q96A23 557 aaPredicted RBP9.22□□□□□ -0.93
SSBP1-209ENST00000473783 TMEM186Q96B77 213 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 FBXO17Q96EF6 278 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 VSTM2LQ96N03 204 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 NAP1L3Q99457 506 aaPredicted RBP9.22□□□□□ -0.93
SSBP1-209ENST00000473783 VRK1Q99986 396 aaPredicted RBP9.22□□□□□ -0.93
SSBP1-209ENST00000473783 SLITRK2Q9H156 845 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 CDC42EP4Q9H3Q1 356 aaKnown RBP9.22□□□□□ -0.93
SSBP1-209ENST00000473783 UNKLQ9H9P5 680 aaKnown RBP9.22□□□□□ -0.93
SSBP1-209ENST00000473783 ESM1Q9NQ30 184 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 HIF1ANQ9NWT6 349 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 ZKSCAN5Q9Y2L8 839 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 PCDHB14Q9Y5E9 798 aa9.22□□□□□ -0.93
SSBP1-209ENST00000473783 A0A087WZY1 265 aa9.21□□□□□ -0.94
SSBP1-209ENST00000473783 IGLV3-32A0A0A0MS00 114 aa9.21□□□□□ -0.94
SSBP1-209ENST00000473783 C7orf72A4D263 438 aa9.21□□□□□ -0.94
SSBP1-209ENST00000473783 GOLGA6L22H0YM25 854 aa9.21□□□□□ -0.94
SSBP1-209ENST00000473783 M0R1B8 84 aa9.21□□□□□ -0.94
SSBP1-209ENST00000473783 PRKD3O94806 890 aa9.21□□□□□ -0.94
SSBP1-209ENST00000473783 GBAP04062 536 aa9.21□□□□□ -0.94
SSBP1-209ENST00000473783 PCSK2P16519 638 aa9.21□□□□□ -0.94
SSBP1-209ENST00000473783 IGHV1-2P23083 117 aa9.21□□□□□ -0.94
SSBP1-209ENST00000473783 FEN1P39748 380 aaKnown RBP9.21□□□□□ -0.94
SSBP1-209ENST00000473783 KCNJ1P48048 391 aa9.21□□□□□ -0.94
SSBP1-209ENST00000473783 VPS41P49754 854 aa9.21□□□□□ -0.94
SSBP1-209ENST00000473783 CLK3P49761 638 aaKnown RBP9.21□□□□□ -0.94
SSBP1-209ENST00000473783 KHKP50053 298 aa9.21□□□□□ -0.94
SSBP1-209ENST00000473783 CARD18P57730 90 aa9.21□□□□□ -0.94
SSBP1-209ENST00000473783 TRIP13Q15645 432 aaPredicted RBP9.21□□□□□ -0.94
SSBP1-209ENST00000473783 ARL13AQ5H913 290 aaPredicted RBP9.21□□□□□ -0.94
SSBP1-209ENST00000473783 SH2D4BQ5SQS7 431 aa9.21□□□□□ -0.94
SSBP1-209ENST00000473783 SLC48A1Q6P1K1 146 aa9.21□□□□□ -0.94
SSBP1-209ENST00000473783 NPSR1Q6W5P4 371 aa9.21□□□□□ -0.94
SSBP1-209ENST00000473783 THSD4Q6ZMP0 1018 aa9.21□□□□□ -0.94
SSBP1-209ENST00000473783 ZNF433Q8N7K0 673 aaPredicted RBP9.21□□□□□ -0.94
SSBP1-209ENST00000473783 CEP112Q8N8E3 955 aa9.21□□□□□ -0.94
SSBP1-209ENST00000473783 PDPRQ8NCN5 879 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms