RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 CYP4B1P13584 511 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 ADSLP30566 484 aaPredicted RBP8.33□□□□□ -1.08
SMC4-214ENST00000472991 PIGAP37287 484 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 RFC3P40938 356 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 DNASE1L1P49184 302 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 KHKP50053 298 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 MEOX1P50221 254 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 PNLIPRP2P54317 469 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 MLLT10P55197 1068 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 RPP38P78345 283 aaKnown RBP8.33□□□□□ -1.08
SMC4-214ENST00000472991 EFR3AQ14156 821 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 MAPRE2Q15555 327 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 INPP5JQ15735 1006 aaPredicted RBP8.33□□□□□ -1.08
SMC4-214ENST00000472991 INAQ16352 499 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 DCST2Q5T1A1 773 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 LRIF1Q5T3J3 769 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 CCNJQ5T5M9 372 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 NUP54Q7Z3B4 507 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.33□□□□□ -1.08
SMC4-214ENST00000472991 PIGWQ7Z7B1 504 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 ZAR1Q86SH2 424 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 DHDDSQ86SQ9 333 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 MTDHQ86UE4 582 aaKnown RBP8.33□□□□□ -1.08
SMC4-214ENST00000472991 SNX32Q86XE0 403 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 RNF130Q86XS8 419 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 RP1L1Q8IWN7 2480 aaPredicted RBP8.33□□□□□ -1.08
SMC4-214ENST00000472991 SULF2Q8IWU5 870 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 MSRB3Q8IXL7 192 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 CISD2Q8N5K1 135 aaKnown RBP8.33□□□□□ -1.08
SMC4-214ENST00000472991 POU5F2Q8N7G0 328 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 SPPL2AQ8TCT8 520 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 MIPOL1Q8TD10 442 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 TSPEARQ8WU66 669 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 RAB8BQ92930 207 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 FRMD6Q96NE9 622 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 TAAR6Q96RI8 345 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 CCT8L2Q96SF2 557 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 BTBD2Q9BX70 525 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 TPT1P8Q9HAU6 139 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 SH2D2AQ9NP31 389 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 FBXO34Q9NWN3 711 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 SLC25A37Q9NYZ2 338 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 FLRT3Q9NZU0 649 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 CNIH4Q9P003 139 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 VAPAQ9P0L0 249 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 SLAMF8Q9P0V8 285 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 MRTO4Q9UKD2 239 aaKnown RBP8.33□□□□□ -1.08
SMC4-214ENST00000472991 NTNG1Q9Y2I2 539 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 NDUFAF1Q9Y375 327 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 PCDHB14Q9Y5E9 798 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 ESPL1Q14674 2120 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 ARHGAP21Q5T5U3 1957 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 MPDZO75970 2070 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 KIAA1549Q9HCM3 1950 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 TRBV5-3A0A0A0MS03 114 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 PINLYPA6NC86 204 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 PRAMEF25A6NGN4 478 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 KLRC4-KLRK1H3BQV0 150 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 FBP2O00757 339 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 SLC22A2O15244 555 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 SUV39H1O43463 412 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 SCO2O43819 266 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 HS6ST1O60243 411 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 ICOSLGO75144 302 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 FAM107AO95990 144 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 CNR1P21554 472 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 CASP3P42574 277 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 ANXA11P50995 505 aaKnown RBP8.32□□□□□ -1.08
SMC4-214ENST00000472991 MVDP53602 400 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 PSMD4P55036 377 aaKnown RBP8.32□□□□□ -1.08
SMC4-214ENST00000472991 KCNJ2P63252 427 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 FUT5Q11128 374 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 NFYCQ13952 458 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.32□□□□□ -1.084e-9■■■■■ 118.1
SMC4-214ENST00000472991 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.32□□□□□ -1.081e-13■■■■■ 65.9
SMC4-214ENST00000472991 REP15Q6BDI9 236 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 FAM180AQ6UWF9 173 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 OLIG3Q7RTU3 272 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 ATCAYQ86WG3 371 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 DPP10Q8N608 796 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 OR2M7Q8NG81 312 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 FAM110BQ8TC76 370 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 GRHL3Q8TE85 626 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 XAGE5Q8WWM1 108 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 TMCO6Q96DC7 493 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 SNRNP40Q96DI7 357 aaKnown RBP8.32□□□□□ -1.08
SMC4-214ENST00000472991 SECISBP2Q96T21 854 aaKnown RBP8.32□□□□□ -1.08
SMC4-214ENST00000472991 FAM173AQ9BQD7 235 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 DOHHQ9BU89 302 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 CCDC106Q9BWC9 280 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 OSBPL11Q9BXB4 747 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 MYLK2Q9H1R3 596 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 METTL7AQ9H8H3 244 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 IL1RL2Q9HB29 575 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 PROK2Q9HC23 129 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 EXD2Q9NVH0 621 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 ASF1BQ9NVP2 202 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 GIN1Q9NXP7 522 aa8.32□□□□□ -1.08
SMC4-214ENST00000472991 TUBA8Q9NY65 449 aaPredicted RBP8.32□□□□□ -1.08
SMC4-214ENST00000472991 KLRF1Q9NZS2 232 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms