RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 ZNF248Q8NDW4 579 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 CATSPER1Q8NEC5 780 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 OR10Q1Q8NGQ4 319 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 VANGL1Q8TAA9 524 aaPredicted RBP9.01□□□□□ -0.97
CCM2-204ENST00000470837 FAM110BQ8TC76 370 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 KCNE4Q8WWG9 221 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 ASB15Q8WXK1 588 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 FGF11Q92914 225 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 MESP1Q9BRJ9 268 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 TBL1XR1Q9BZK7 514 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 QRSL1Q9H0R6 528 aaKnown RBP9.01□□□□□ -0.97
CCM2-204ENST00000470837 ZBTB20Q9HC78 741 aaPredicted RBP9.01□□□□□ -0.97
CCM2-204ENST00000470837 ATP13A2Q9NQ11 1180 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 SLC35A3Q9Y2D2 325 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 YARS2Q9Y2Z4 477 aaKnown RBP9.01□□□□□ -0.97
CCM2-204ENST00000470837 DTNAQ9Y4J8 743 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 KNTC1P50748 2209 aa9□□□□□ -0.97
CCM2-204ENST00000470837 NPIPA5A0A0B4J1W7 369 aa9□□□□□ -0.97
CCM2-204ENST00000470837 OR6C70A6NIJ9 312 aa9□□□□□ -0.97
CCM2-204ENST00000470837 NPIPA7E9PJI5 369 aa9□□□□□ -0.97
CCM2-204ENST00000470837 H3BNX3 289 aa9□□□□□ -0.97
CCM2-204ENST00000470837 ADAMDEC1O15204 470 aa9□□□□□ -0.97
CCM2-204ENST00000470837 CLOCKO15516 846 aa9□□□□□ -0.97
CCM2-204ENST00000470837 PRKNO60260 465 aaPredicted RBP9□□□□□ -0.97
CCM2-204ENST00000470837 ITGA10O75578 1167 aa9□□□□□ -0.97
CCM2-204ENST00000470837 PPM1BO75688 479 aa9□□□□□ -0.97
CCM2-204ENST00000470837 CYP7B1O75881 506 aa9□□□□□ -0.97
CCM2-204ENST00000470837 OR2J2O76002 312 aa9□□□□□ -0.97
CCM2-204ENST00000470837 CSTAP01040 98 aa9□□□□□ -0.97
CCM2-204ENST00000470837 MT-ND1P03886 318 aa9□□□□□ -0.97
CCM2-204ENST00000470837 NPIPA8P0DM63 369 aa9□□□□□ -0.97
CCM2-204ENST00000470837 CD247P20963 164 aa9□□□□□ -0.97
CCM2-204ENST00000470837 ITGA3P26006 1051 aa9□□□□□ -0.97
CCM2-204ENST00000470837 CASRP41180 1078 aa9□□□□□ -0.97
CCM2-204ENST00000470837 OR1E2P47887 323 aa9□□□□□ -0.97
CCM2-204ENST00000470837 ID4P47928 161 aa9□□□□□ -0.97
CCM2-204ENST00000470837 RGS8P57771 180 aaPredicted RBP9□□□□□ -0.97
CCM2-204ENST00000470837 KCNJ10P78508 379 aa9□□□□□ -0.97
CCM2-204ENST00000470837 TRIP10Q15642 601 aa9□□□□□ -0.97
CCM2-204ENST00000470837 ATP6AP1Q15904 470 aa9□□□□□ -0.97
CCM2-204ENST00000470837 ZNF141Q15928 474 aa9□□□□□ -0.97
CCM2-204ENST00000470837 DCAF10Q5QP82 559 aa9□□□□□ -0.97
CCM2-204ENST00000470837 PDZK1Q5T2W1 519 aa9□□□□□ -0.97
CCM2-204ENST00000470837 RNF220Q5VTB9 566 aa9□□□□□ -0.97
CCM2-204ENST00000470837 DEF8Q6ZN54 512 aa9□□□□□ -0.97
CCM2-204ENST00000470837 NUP54Q7Z3B4 507 aa9□□□□□ -0.97
CCM2-204ENST00000470837 VASH2Q86V25 355 aa9□□□□□ -0.97
CCM2-204ENST00000470837 ZNF440Q8IYI8 595 aa9□□□□□ -0.97
CCM2-204ENST00000470837 FAM86B1Q8N7N1 296 aa9□□□□□ -0.97
CCM2-204ENST00000470837 ZNF441Q8N8Z8 693 aa9□□□□□ -0.97
CCM2-204ENST00000470837 TMEM102Q8N9M5 508 aaPredicted RBP9□□□□□ -0.97
CCM2-204ENST00000470837 ICA1LQ8NDH6 482 aa9□□□□□ -0.97
CCM2-204ENST00000470837 OR5M3Q8NGP4 307 aa9□□□□□ -0.97
CCM2-204ENST00000470837 LRTOMTQ8WZ04 291 aa9□□□□□ -0.97
CCM2-204ENST00000470837 NR4A3Q92570 626 aa9□□□□□ -0.97
CCM2-204ENST00000470837 EME1Q96AY2 570 aa9□□□□□ -0.97
CCM2-204ENST00000470837 SLCO4A1Q96BD0 722 aa9□□□□□ -0.97
CCM2-204ENST00000470837 CENPNQ96H22 339 aaPredicted RBP9□□□□□ -0.97
CCM2-204ENST00000470837 NAF1Q96HR8 494 aaKnown RBP9□□□□□ -0.97
CCM2-204ENST00000470837 THOC3Q96J01 351 aaKnown RBP9□□□□□ -0.97
CCM2-204ENST00000470837 CDCP1Q9H5V8 836 aa9□□□□□ -0.97
CCM2-204ENST00000470837 REEP1Q9H902 201 aa9□□□□□ -0.97
CCM2-204ENST00000470837 LIN28AQ9H9Z2 209 aaKnown RBP9□□□□□ -0.97
CCM2-204ENST00000470837 SELENONQ9NZV5 590 aa9□□□□□ -0.97
CCM2-204ENST00000470837 DNAJB9Q9UBS3 223 aa9□□□□□ -0.97
CCM2-204ENST00000470837 ZNF223Q9UK11 482 aaPredicted RBP9□□□□□ -0.97
CCM2-204ENST00000470837 MSRB2Q9Y3D2 182 aa9□□□□□ -0.97
CCM2-204ENST00000470837 CEP250Q9BV73 2442 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 SERINC4A6NH21 518 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 KLK10O43240 276 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 UGT2B17O75795 530 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 OXSR1O95747 527 aaPredicted RBP8.99□□□□□ -0.97
CCM2-204ENST00000470837 LGI1O95970 557 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 IGKV1D-16P01601 117 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 PRKAR1AP10644 381 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 ITGAMP11215 1152 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 CYP4B1P13584 511 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 RHCEP18577 417 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 SPINK2P20155 84 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 TBXA2RP21731 343 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 RPS4Y1P22090 263 aaKnown RBP8.99□□□□□ -0.97
CCM2-204ENST00000470837 MAGEA2P43356 314 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 CRYBA2P53672 197 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 COPZ1P61923 177 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 SPIBQ01892 262 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 MEP1AQ16819 746 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 GRAMD1BQ3KR37 738 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 MRPL2Q5T653 305 aaKnown RBP8.99□□□□□ -0.97
CCM2-204ENST00000470837 ABHD17BQ5VST6 288 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 OR2T5Q6IEZ7 315 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 ZNF836Q6ZNA1 936 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 ZNF550Q7Z398 422 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 PIWIL3Q7Z3Z3 882 aaKnown RBP8.99□□□□□ -0.97
CCM2-204ENST00000470837 AMIGO2Q86SJ2 522 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 ZDHHC13Q8IUH4 622 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 MISPQ8IVT2 679 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 TMCO5AQ8N6Q1 288 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 PIK3C3Q8NEB9 887 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 OR2T29Q8NH02 315 aa8.99□□□□□ -0.97
CCM2-204ENST00000470837 PHOSPHO1Q8TCT1 267 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms