RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 PEPDP12955 493 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 PPP3CBP16298 524 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 ZNF37AP17032 561 aaPredicted RBP4.67□□□□□ -1.66
PTPN4-209ENST00000469511 NT5EP21589 574 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 USF1P22415 310 aaPredicted RBP4.67□□□□□ -1.66
PTPN4-209ENST00000469511 IL2RGP31785 369 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 BSGP35613 385 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 MAGEA3P43357 314 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 TAS2R39P59534 338 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 ERVFRD-1P60508 538 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 TPM4P67936 248 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 DDX39BQ13838 428 aaKnown RBP4.67□□□□□ -1.66
PTPN4-209ENST00000469511 RCN2Q14257 317 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 LTB4RQ15722 352 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 BCL2A1Q16548 175 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 CCNG2Q16589 344 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 TRMT12Q53H54 448 aaKnown RBP4.67□□□□□ -1.66
PTPN4-209ENST00000469511 DEPDC1Q5TB30 811 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 KHDRBS2Q5VWX1 349 aaKnown RBP4.67□□□□□ -1.66
PTPN4-209ENST00000469511 FAM166AQ6J272 317 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 TTC27Q6P3X3 843 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 TMEM81Q6P7N7 255 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 AAGABQ6PD74 315 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 TRMT10BQ6PF06 316 aaKnown RBP4.67□□□□□ -1.66
PTPN4-209ENST00000469511 CLEC2AQ6UVW9 174 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 CHMP1BQ7LBR1 199 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 GSTA5Q7RTV2 222 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 MILR1Q7Z6M3 343 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 GGNQ86UU5 652 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 KRT78Q8N1N4 520 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 RFLNBQ8N5W9 214 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 UBL4BQ8N7F7 174 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 C3orf56Q8N813 242 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 SNX31Q8N9S9 440 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 OR2M3Q8NG83 312 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 OR4N2Q8NGD1 307 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 OR2W6PQ8NHA6 318 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 SGMS2Q8NHU3 365 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 UHMK1Q8TAS1 419 aaKnown RBP4.67□□□□□ -1.66
PTPN4-209ENST00000469511 ABHD4Q8TB40 342 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 RNF138Q8WVD3 245 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 FAM168AQ92567 244 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 TANKQ92844 425 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 WDR34Q96EX3 536 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 PDLIM5Q96HC4 596 aaKnown RBP4.67□□□□□ -1.66
PTPN4-209ENST00000469511 VPS39Q96JC1 886 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 GBP4Q96PP9 640 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 ADOQ96SZ5 270 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 MTERF1Q99551 399 aaKnown RBP4.67□□□□□ -1.66
PTPN4-209ENST00000469511 KCNJ15Q99712 375 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 DNAJC11Q9NVH1 559 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.67□□□□□ -1.66
PTPN4-209ENST00000469511 DKKL1Q9UK85 242 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 GPR52Q9Y2T5 361 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 OARD1Q9Y530 152 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 PSAT1Q9Y617 370 aa4.67□□□□□ -1.66
PTPN4-209ENST00000469511 KMT2CQ8NEZ4 4911 aaKnown RBP4.66□□□□□ -1.66
PTPN4-209ENST00000469511 TMEM89A2RUT3 159 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 SYNDIG1LA6NDD5 238 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 PABPN1LA6NDY0 278 aaKnown RBP4.66□□□□□ -1.66
PTPN4-209ENST00000469511 MIF4GDA9UHW6 222 aaKnown RBP4.66□□□□□ -1.66
PTPN4-209ENST00000469511 ZNF814B7Z6K7 855 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 SCO2O43819 266 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 SS18L1O75177 396 aaPredicted RBP4.66□□□□□ -1.66
PTPN4-209ENST00000469511 REM1O75628 298 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 MBD3O95983 291 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 KRT14P02533 472 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 AMY2AP04746 511 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 FAM58BPP0C7Q3 252 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 CPMP14384 443 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 SLC25A16P16260 332 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 NAGAP17050 411 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 KRT15P19012 456 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 HK1P19367 917 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 AMY2BP19961 511 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 PSMB1P20618 241 aaKnown RBP4.66□□□□□ -1.66
PTPN4-209ENST00000469511 IL11P20809 199 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 TTKP33981 857 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 GALNSP34059 522 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 GCKP35557 465 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 CASP2P42575 452 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 MAGEA6P43360 314 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 PIK3CGP48736 1102 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 TMED10P49755 219 aaKnown RBP4.66□□□□□ -1.66
PTPN4-209ENST00000469511 EMDP50402 254 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 XKP51811 444 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 NRG3P56975 720 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 MRPS35P82673 323 aaKnown RBP4.66□□□□□ -1.66
PTPN4-209ENST00000469511 CDKL1Q00532 357 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 CDK16Q00536 496 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 PLCXD2Q0VAA5 305 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 SQLEQ14534 574 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 CRYMQ14894 314 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 P2RY6Q15077 328 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 TGFBIQ15582 683 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 OR4D1Q15615 310 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 SGCBQ16585 318 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 PRICKLE4Q2TBC4 344 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 TEDDM1Q5T9Z0 273 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 LGSNQ5TDP6 509 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms