RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 CLDN16Q9Y5I7 305 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 CLCA3PQ9Y6N3 262 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 IGHV5-10-1A0A0J9YXX1 117 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 A0A1W2PQM1 296 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 GXYLT2A0PJZ3 443 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 TRAPPC13A5PLN9 417 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 CDHR4A6H8M9 788 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 OR6C76A6NM76 312 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 D6RAR5 112 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 H3BN98 237 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 ZNF701M0R085 212 aaPredicted RBP8.66□□□□□ -1.02
SMC1A-205ENST00000469129 SEMA7AO75326 666 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 GASTP01350 101 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 SP9P0CG40 484 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 POU2F1P14859 743 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 JUNBP17275 347 aaPredicted RBP8.66□□□□□ -1.02
SMC1A-205ENST00000469129 RORAP35398 523 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 KRT20P35900 424 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 POLR2IP36954 125 aaKnown RBP8.66□□□□□ -1.02
SMC1A-205ENST00000469129 NBL1P41271 181 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 GRK6P43250 576 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 IDH2P48735 452 aaKnown RBP8.66□□□□□ -1.02
SMC1A-205ENST00000469129 RHAGQ02094 409 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 OCA2Q04671 838 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 TARDBPQ13148 414 aaKnown RBP eCLIP8.66□□□□□ -1.02
SMC1A-205ENST00000469129 ILKQ13418 452 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 TUBA3CQ13748 450 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 ERV3-1Q14264 604 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 SEC23BQ15437 767 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 ZNF141Q15928 474 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.66□□□□□ -1.02
SMC1A-205ENST00000469129 ZBED5Q49AG3 693 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 FOXB2Q5VYV0 432 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 SLX4IPQ5VYV7 408 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 HLA-DQA1Q5Y7H0 255 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 C1orf94Q6P1W5 598 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 PODNL1Q6PEZ8 512 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 CASP12Q6UXS9 341 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 ZNF730Q6ZMV8 503 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 RBM44Q6ZP01 1051 aaKnown RBP8.66□□□□□ -1.02
SMC1A-205ENST00000469129 KCTD8Q6ZWB6 473 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 ZNF550Q7Z398 422 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 B3GNT8Q7Z7M8 397 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 HMGN2P46Q86SG4 172 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 ZNF440Q8IYI8 595 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 ENTHD1Q8IYW4 607 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 ALDH16A1Q8IZ83 802 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 ZNF615Q8N8J6 731 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 ZNF527Q8NB42 609 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 MORN4Q8NDC4 146 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 BPIFB6Q8NFQ5 453 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 C16orf52Q8NHV5 167 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 TEX47Q8TBZ9 253 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 SLC41A3Q96GZ6 507 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 NODALQ96S42 347 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 TSC22D3Q99576 134 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 GTPBP2Q9BX10 602 aaKnown RBP8.66□□□□□ -1.02
SMC1A-205ENST00000469129 TEX12Q9BXU0 123 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 RSPO3Q9BXY4 272 aaPredicted RBP8.66□□□□□ -1.02
SMC1A-205ENST00000469129 ITPAQ9BY32 194 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 TGIF2Q9GZN2 237 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 HOXD1Q9GZZ0 328 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 RBM38Q9H0Z9 239 aaKnown RBP8.66□□□□□ -1.02
SMC1A-205ENST00000469129 POLR1BQ9H9Y6 1135 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 PNO1Q9NRX1 252 aaKnown RBP8.66□□□□□ -1.02
SMC1A-205ENST00000469129 PLCXD1Q9NUJ7 323 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 ATXN7L1Q9ULK2 861 aaPredicted RBP8.66□□□□□ -1.02
SMC1A-205ENST00000469129 RNF6Q9Y252 685 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 TMEM5Q9Y2B1 443 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 COMMD3-BMI1R4GMX3 469 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 MYO15AQ9UKN7 3530 aa8.66□□□□□ -1.02
SMC1A-205ENST00000469129 IGLV3-12A0A075B6K2 115 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 SH3D21A4FU49 640 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 FRG2CA6NGY1 282 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 PATE3B3GLJ2 98 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 PEX12O00623 359 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 FLRT2O43155 660 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 FRS3O43559 492 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 RGS10O43665 173 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 SCRG1O75711 98 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 GP1BAP07359 652 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 ITIH1P19827 911 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 AGXTP21549 392 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 CHMP24386 653 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 FPR3P25089 353 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 FMO3P31513 532 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 CSTF2P33240 577 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMC1A-205ENST00000469129 MPLP40238 635 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 PPICP45877 212 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 RFX3P48380 749 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 ATP12AP54707 1039 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 SLC35A2P78381 396 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 TSPAN31Q12999 210 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 FGFBP1Q14512 234 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 PTGES3Q15185 160 aaKnown RBP8.65□□□□□ -1.02
SMC1A-205ENST00000469129 CNPY1Q3B7I2 92 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 PDZK1Q5T2W1 519 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 PHF19Q5T6S3 580 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 ZNF613Q6PF04 617 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 NPSR1Q6W5P4 371 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms