RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	GIMAP5	Q96F15	307 aa		11.12	□□□□□ -0.63
CTNS-205	ENST00000467663	SCMH1	Q96GD3	660 aa		11.12	□□□□□ -0.63
CTNS-205	ENST00000467663	FBXL20	Q96IG2	436 aa		11.12	□□□□□ -0.63
CTNS-205	ENST00000467663	ZNF607	Q96SK3	696 aa		11.12	□□□□□ -0.63
CTNS-205	ENST00000467663	TRIM8	Q9BZR9	551 aa		11.12	□□□□□ -0.63
CTNS-205	ENST00000467663	OR51I1	Q9H343	314 aa		11.12	□□□□□ -0.63
CTNS-205	ENST00000467663	PIGU	Q9H490	435 aa		11.12	□□□□□ -0.63
CTNS-205	ENST00000467663	EVA1A	Q9H8M9	152 aa		11.12	□□□□□ -0.63
CTNS-205	ENST00000467663	ANKRD10	Q9NXR5	420 aa		11.12	□□□□□ -0.63
CTNS-205	ENST00000467663	C6orf203	Q9P0P8	240 aa	Predicted RBP	11.12	□□□□□ -0.63
CTNS-205	ENST00000467663	CLCA3P	Q9Y6N3	262 aa		11.12	□□□□□ -0.63
CTNS-205	ENST00000467663		A0A0G2JPF8	293 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663		A0A1B0GUH1	482 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	DHRS12	A0PJE2	317 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663		A1L4Q6	167 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663		A8MUA0	341 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	HNRNPCL2	B2RXH8	293 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	HNRNPCL3	B7ZW38	293 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	TGFBR3L	H3BV60	316 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	HMGN4	O00479	90 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	NEURL1	O76050	574 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	TFPT	P0C1Z6	253 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	HNRNPCL4	P0DMR1	293 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	CD46	P15529	392 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	TRHR	P34981	398 aa	Predicted RBP	11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	MSX2	P35548	267 aa	Predicted RBP	11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	MAP3K8	P41279	467 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	MAN2A2	P49641	1150 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	GPR143	P51810	404 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	PCBP3	P57721	371 aa	Known RBP	11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	MLF1	P58340	268 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	ID2	Q02363	134 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	CHRNB3	Q05901	458 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	LTB4R	Q15722	352 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	SNCB	Q16143	134 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	COX20	Q5RI15	118 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	HIST2H2BC	Q6DN03	193 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	HEPHL1	Q6MZM0	1159 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	GFRAL	Q6UXV0	394 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	CBLL1	Q75N03	491 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	EIF3M	Q7L2H7	374 aa	Known RBP	11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	SPPL2C	Q8IUH8	684 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	B3GNT7	Q8NFL0	401 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	ADCY4	Q8NFM4	1077 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	RELT	Q969Z4	430 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	TRNT1	Q96Q11	434 aa	Known RBP	11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	OR7D2	Q96RA2	312 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	LMF2	Q9BU23	707 aa	Known RBP	11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	PIF1	Q9H611	641 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	CACYBP	Q9HB71	228 aa	Known RBP	11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	LRFN1	Q9P244	771 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	STOML1	Q9UBI4	398 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	AP4S1	Q9Y587	144 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	NAV2	Q8IVL1	2488 aa		11.11	□□□□□ -0.63
CTNS-205	ENST00000467663	UTP20	O75691	2785 aa	Known RBP	11.1	□□□□□ -0.63
CTNS-205	ENST00000467663		A0A1W2PS29	197 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	TCRBV5S2	A0A599	114 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	C17orf105	B2RV13	164 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	NKX2-2	O95096	273 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	PGM3	O95394	542 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	CBX7	O95931	251 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	SP1	P08047	785 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	OR12D1	P0DN82	309 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	RAP2A	P10114	183 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	NR2F1	P10589	423 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	ATP6V1B2	P21281	511 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	S1PR1	P21453	382 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	LCN1	P31025	176 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	GCK	P35557	465 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	ST13	P50502	369 aa	Known RBP	11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	PER3	P56645	1201 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	MRPS35	P82673	323 aa	Known RBP	11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	HPCA	P84074	193 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	PMP22	Q01453	160 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	OC90	Q02509	493 aa	Predicted RBP	11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	ZNF267	Q14586	743 aa	Predicted RBP	11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	ZSWIM7	Q19AV6	140 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	ARHGAP11B	Q3KRB8	267 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	TRMT12	Q53H54	448 aa	Known RBP	11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	ZNF468	Q5VIY5	522 aa	Predicted RBP	11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	SLC25A25	Q6KCM7	469 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	FAM111B	Q6SJ93	734 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	CYP2R1	Q6VVX0	501 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	LRRC74B	Q6ZQY2	392 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	ZNF227	Q86WZ6	799 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	CLEC4F	Q8N1N0	589 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	TMEM178A	Q8NBL3	297 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	CHDH	Q8NE62	594 aa	Predicted RBP	11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	C17orf47	Q8NEP4	570 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	SLC38A5	Q8WUX1	472 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	XAGE5	Q8WWM1	108 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	PYURF	Q96I23	114 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	MAGED4	Q96JG8	741 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	HES7	Q9BYE0	225 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	DEFB126	Q9BYW3	111 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	OR10A5	Q9H207	317 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	KLHL1	Q9NR64	748 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	PNO1	Q9NRX1	252 aa	Known RBP	11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	COPS7A	Q9UBW8	275 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms