RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 GPR151Q8TDV0 419 aa17.25■□□□□ 0.35
COL9A3-206ENST00000466532 UBLCP1Q8WVY7 318 aaPredicted RBP17.25■□□□□ 0.35
COL9A3-206ENST00000466532 CIDECQ96AQ7 238 aaPredicted RBP17.25■□□□□ 0.35
COL9A3-206ENST00000466532 WFIKKN1Q96NZ8 548 aa17.25■□□□□ 0.35
COL9A3-206ENST00000466532 RNF122Q9H9V4 155 aa17.25■□□□□ 0.35
COL9A3-206ENST00000466532 BEX4Q9NWD9 120 aaPredicted RBP17.25■□□□□ 0.35
COL9A3-206ENST00000466532 C1orf109Q9NX04 203 aa17.25■□□□□ 0.35
COL9A3-206ENST00000466532 FIS1Q9Y3D6 152 aa17.25■□□□□ 0.35
COL9A3-206ENST00000466532 ZNF175Q9Y473 711 aa17.25■□□□□ 0.35
COL9A3-206ENST00000466532 AP4B1Q9Y6B7 739 aa17.25■□□□□ 0.35
COL9A3-206ENST00000466532 NPIPB8E9PQR5 432 aa17.24■□□□□ 0.35
COL9A3-206ENST00000466532 CTIFO43310 598 aaKnown RBP17.24■□□□□ 0.35
COL9A3-206ENST00000466532 EMC8O43402 210 aa17.24■□□□□ 0.35
COL9A3-206ENST00000466532 POU2F1P14859 743 aa17.24■□□□□ 0.35
COL9A3-206ENST00000466532 HOXB4P17483 251 aaPredicted RBP17.24■□□□□ 0.35
COL9A3-206ENST00000466532 HOXC12P31275 282 aa17.24■□□□□ 0.35
COL9A3-206ENST00000466532 APOOLQ6UXV4 268 aa17.24■□□□□ 0.35
COL9A3-206ENST00000466532 ZFP28Q8NHY6 868 aa17.24■□□□□ 0.35
COL9A3-206ENST00000466532 SLC39A3Q9BRY0 314 aa17.24■□□□□ 0.35
COL9A3-206ENST00000466532 MED18Q9BUE0 208 aa17.24■□□□□ 0.35
COL9A3-206ENST00000466532 ELOVL5Q9NYP7 299 aa17.24■□□□□ 0.35
COL9A3-206ENST00000466532 ZNF226Q9NYT6 803 aa17.24■□□□□ 0.35
COL9A3-206ENST00000466532 VDAC3Q9Y277 283 aa17.24■□□□□ 0.35
COL9A3-206ENST00000466532 NUP214P35658 2090 aaPredicted RBP17.24■□□□□ 0.35
COL9A3-206ENST00000466532 NAV3Q8IVL0 2385 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 IGLV3-32A0A0A0MS00 114 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 SHISA8B8ZZ34 492 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 AZIN1O14977 448 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 AKAP10O43572 662 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 NKX2-2O95096 273 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 CGAP01215 116 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 SDC1P18827 310 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 UGT2B10P36537 528 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 KCNJ5P48544 419 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 PRKAG1P54619 331 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 FGFBP1Q14512 234 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 SGCBQ16585 318 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 VPS26BQ4G0F5 336 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 ZNF385BQ569K4 471 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 SZRD1Q7Z422 152 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 GALNT10Q86SR1 603 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 EXOC3L1Q86VI1 746 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 TDRPQ86YL5 185 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 C4orf33Q8N1A6 199 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 METTL25Q8N6Q8 603 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 CDRT4Q8N9R6 151 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 NUP43Q8NFH3 380 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 OR2T11Q8NH01 316 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 CEP70Q8NHQ1 597 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 EPS8L3Q8TE67 593 aaKnown RBP17.23■□□□□ 0.35
COL9A3-206ENST00000466532 SLC9A6Q92581 669 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 HOXB13Q92826 284 aaPredicted RBP17.23■□□□□ 0.35
COL9A3-206ENST00000466532 PPCDCQ96CD2 204 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 ZNF764Q96H86 408 aaPredicted RBP17.23■□□□□ 0.35
COL9A3-206ENST00000466532 TSSK3Q96PN8 268 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 CCT7Q99832 543 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 IQCGQ9H095 443 aaKnown RBP17.23■□□□□ 0.35
COL9A3-206ENST00000466532 REEP4Q9H6H4 257 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 PPCSQ9HAB8 311 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 SH3BP4Q9P0V3 963 aa17.23■□□□□ 0.35
COL9A3-206ENST00000466532 DEFB108AA8MXU0 73 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 SIAH2O43255 324 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 CD8BP10966 210 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 NEFHP12036 1026 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 FCGR2AP12318 317 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 KRT4P19013 534 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 CRYGSP22914 178 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 CCKARP32238 428 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 MAP3K8P41279 467 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 MANFP55145 182 aaKnown RBP17.22■□□□□ 0.35
COL9A3-206ENST00000466532 RPL38P63173 70 aaKnown RBP17.22■□□□□ 0.35
COL9A3-206ENST00000466532 NKX6-1P78426 367 aaPredicted RBP17.22■□□□□ 0.35
COL9A3-206ENST00000466532 OCRLQ01968 901 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 TMEM44Q2T9K0 475 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 PPP4R4Q6NUP7 873 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 Q6ZSR9 355 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 GGNQ86UU5 652 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 CXorf67Q86X51 503 aaPredicted RBP17.22■□□□□ 0.35
COL9A3-206ENST00000466532 KRTAP1-3Q8IUG1 177 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 C10orf107Q8IVU9 208 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 ZNF610Q8N9Z0 462 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 CLHC1Q8NHS4 586 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 FBXO30Q8TB52 745 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 ZBED6CLQ96FA7 236 aaPredicted RBP17.22■□□□□ 0.35
COL9A3-206ENST00000466532 PIK3IP1Q96FE7 263 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 FCRL1Q96LA6 429 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 STOML1Q9UBI4 398 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 MID2Q9UJV3 735 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 PROCRQ9UNN8 238 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 ARID1AO14497 2285 aa17.22■□□□□ 0.35
COL9A3-206ENST00000466532 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.21■□□□□ 0.35
COL9A3-206ENST00000466532 ALG1L2C9J202 215 aa17.21■□□□□ 0.35
COL9A3-206ENST00000466532 C16orf97H3BN30 126 aa17.21■□□□□ 0.35
COL9A3-206ENST00000466532 EIF1AYO14602 144 aaKnown RBP17.21■□□□□ 0.35
COL9A3-206ENST00000466532 NDUFB5O43674 189 aa17.21■□□□□ 0.35
COL9A3-206ENST00000466532 TBX19O60806 448 aa17.21■□□□□ 0.35
COL9A3-206ENST00000466532 AQP8O94778 261 aa17.21■□□□□ 0.35
COL9A3-206ENST00000466532 OXSR1O95747 527 aaPredicted RBP17.21■□□□□ 0.35
COL9A3-206ENST00000466532 CHEK2O96017 543 aa17.21■□□□□ 0.35
COL9A3-206ENST00000466532 LINC00032P0C843 101 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms