RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 ADAMTS16Q8TE57 1224 aa3.1□□□□□ -1.91
LRCH3-211ENST00000466054 UPRTQ96BW1 309 aa3.1□□□□□ -1.91
LRCH3-211ENST00000466054 FAM122AQ96E09 287 aa3.1□□□□□ -1.91
LRCH3-211ENST00000466054 TMEM80Q96HE8 168 aa3.1□□□□□ -1.91
LRCH3-211ENST00000466054 VSIG2Q96IQ7 327 aa3.1□□□□□ -1.91
LRCH3-211ENST00000466054 VPS39Q96JC1 886 aa3.1□□□□□ -1.91
LRCH3-211ENST00000466054 TBCDQ9BTW9 1192 aa3.1□□□□□ -1.91
LRCH3-211ENST00000466054 NFKBIZQ9BYH8 718 aa3.1□□□□□ -1.91
LRCH3-211ENST00000466054 GLT8D2Q9H1C3 349 aa3.1□□□□□ -1.91
LRCH3-211ENST00000466054 ACTR3BQ9P1U1 418 aa3.1□□□□□ -1.91
LRCH3-211ENST00000466054 ANKMY1Q9P2S6 941 aa3.1□□□□□ -1.91
LRCH3-211ENST00000466054 KLHL21Q9UJP4 597 aa3.1□□□□□ -1.91
LRCH3-211ENST00000466054 FLVCR1Q9Y5Y0 555 aa3.1□□□□□ -1.91
LRCH3-211ENST00000466054 AP4B1Q9Y6B7 739 aa3.1□□□□□ -1.91
LRCH3-211ENST00000466054 F8WDY8 70 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 HAT1O14929 419 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 CASKO14936 926 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 SERF1AO75920 110 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 NOL4O94818 638 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 CA3P07451 260 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 IL2RGP31785 369 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 RGRP47804 291 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 P2RY4P51582 365 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 MTTPP55157 894 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 RPL32P62910 135 aaKnown RBP3.09□□□□□ -1.91
LRCH3-211ENST00000466054 KCNJ11Q14654 390 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 TEX44Q53QW1 395 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 UFSP1Q6NVU6 142 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 SLC39A4Q6P5W5 647 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 HSD11B1LQ7Z5J1 315 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 CBWD2Q8IUF1 395 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 GPR65Q8IYL9 337 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 UBQLNLQ8IYU4 475 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 C11orf42Q8N5U0 333 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 CSNK1A1LQ8N752 337 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 OR5AU1Q8NGC0 362 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 BADQ92934 168 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 C18orf25Q96B23 403 aaPredicted RBP3.09□□□□□ -1.91
LRCH3-211ENST00000466054 SLC30A2Q9BRI3 323 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 SLC25A51Q9H1U9 297 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 GPN2Q9H9Y4 310 aaPredicted RBP3.09□□□□□ -1.91
LRCH3-211ENST00000466054 MOKQ9UQ07 419 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 PDE10AQ9Y233 779 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 L3MBTL1Q9Y468 752 aa3.09□□□□□ -1.91
LRCH3-211ENST00000466054 PARD3Q8TEW0 1356 aa3.09□□□□□ -1.92
LRCH3-211ENST00000466054 E7ENQ6 273 aa3.08□□□□□ -1.92
LRCH3-211ENST00000466054 CD55P08174 381 aa3.08□□□□□ -1.92
LRCH3-211ENST00000466054 RPL4P36578 427 aaKnown RBP3.08□□□□□ -1.92
LRCH3-211ENST00000466054 LYZP61626 148 aa3.08□□□□□ -1.92
LRCH3-211ENST00000466054 SCGB2A2Q13296 93 aa3.08□□□□□ -1.92
LRCH3-211ENST00000466054 PRR4Q16378 134 aa3.08□□□□□ -1.92
LRCH3-211ENST00000466054 SBK1Q52WX2 424 aa3.08□□□□□ -1.92
LRCH3-211ENST00000466054 ZNF311Q5JNZ3 666 aa3.08□□□□□ -1.92
LRCH3-211ENST00000466054 NIPAL3Q6P499 406 aa3.08□□□□□ -1.92
LRCH3-211ENST00000466054 ZCCHC12Q6PEW1 402 aa3.08□□□□□ -1.92
LRCH3-211ENST00000466054 CENPUQ71F23 418 aa3.08□□□□□ -1.92
LRCH3-211ENST00000466054 CATSPER4Q7RTX7 472 aa3.08□□□□□ -1.92
LRCH3-211ENST00000466054 GCNT2Q8N0V5 402 aa3.08□□□□□ -1.92
LRCH3-211ENST00000466054 ZSCAN4Q8NAM6 433 aaPredicted RBP3.08□□□□□ -1.92
LRCH3-211ENST00000466054 IL1F10Q8WWZ1 152 aa3.08□□□□□ -1.92
LRCH3-211ENST00000466054 HPDLQ96IR7 371 aa3.08□□□□□ -1.92
LRCH3-211ENST00000466054 VPS35Q96QK1 796 aa3.08□□□□□ -1.92
LRCH3-211ENST00000466054 YTHDF1Q9BYJ9 559 aaKnown RBP3.08□□□□□ -1.92
LRCH3-211ENST00000466054 COG4Q9H9E3 785 aa3.08□□□□□ -1.92
LRCH3-211ENST00000466054 PNO1Q9NRX1 252 aaKnown RBP3.08□□□□□ -1.92
LRCH3-211ENST00000466054 CYTH4Q9UIA0 394 aa3.08□□□□□ -1.92
LRCH3-211ENST00000466054 CRLS1Q9UJA2 301 aa3.08□□□□□ -1.92
LRCH3-211ENST00000466054 SAMD4AQ9UPU9 718 aaKnown RBP3.08□□□□□ -1.92
LRCH3-211ENST00000466054 CROCCQ5TZA2 2017 aa3.08□□□□□ -1.92
LRCH3-211ENST00000466054 CARMIL1Q5VZK9 1371 aa3.08□□□□□ -1.92
LRCH3-211ENST00000466054 A0A0U1RQV5 110 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 EPOPA6NHQ4 379 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 ZSCAN5BA6NJL1 495 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 E9PLD3 99 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 CDX4O14627 284 aaPredicted RBP3.07□□□□□ -1.92
LRCH3-211ENST00000466054 CHADO15335 359 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 CLDN3O15551 220 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 STX11O75558 287 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 CABYRO75952 493 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 ANP32DO95626 131 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 ANXA3P12429 323 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 TNNI3P19429 210 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 PTBP1P26599 531 aaKnown RBP eCLIP3.07□□□□□ -1.92
LRCH3-211ENST00000466054 ADRA1AP35348 466 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 CYLC1P35663 651 aaPredicted RBP3.07□□□□□ -1.92
LRCH3-211ENST00000466054 PTGFRP43088 359 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 RIPPLY3P57055 190 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 BDH1Q02338 343 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 ZNF154Q13106 437 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 DPYSL3Q14195 570 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 ISXQ2M1V0 245 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 CCDC92Q53HC0 331 aaPredicted RBP3.07□□□□□ -1.92
LRCH3-211ENST00000466054 SCYL2Q6P3W7 929 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 ANKRD37Q7Z713 158 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 LHFPL4Q7Z7J7 247 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 SERPINA9Q86WD7 417 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 GPA33Q99795 319 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 TSSK1BQ9BXA7 367 aa3.07□□□□□ -1.92
LRCH3-211ENST00000466054 POLR3FQ9H1D9 316 aaPredicted RBP3.07□□□□□ -1.92
LRCH3-211ENST00000466054 AGPAT5Q9NUQ2 364 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms