RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 LRIG3Q6UXM1 1119 aa17.43■□□□□ 0.38
CCHCR1-210ENST00000464012 APOOLQ6UXV4 268 aa17.43■□□□□ 0.38
CCHCR1-210ENST00000464012 MREGQ8N565 214 aa17.43■□□□□ 0.38
CCHCR1-210ENST00000464012 NUDT8Q8WV74 236 aa17.43■□□□□ 0.38
CCHCR1-210ENST00000464012 TUBGCP3Q96CW5 907 aa17.43■□□□□ 0.38
CCHCR1-210ENST00000464012 C1GALT1C1Q96EU7 318 aa17.43■□□□□ 0.38
CCHCR1-210ENST00000464012 C16orf58Q96GQ5 468 aa17.43■□□□□ 0.38
CCHCR1-210ENST00000464012 PPP1R36Q96LQ0 422 aa17.43■□□□□ 0.38
CCHCR1-210ENST00000464012 TMEM109Q9BVC6 243 aa17.43■□□□□ 0.38
CCHCR1-210ENST00000464012 SFXN3Q9BWM7 321 aa17.43■□□□□ 0.38
CCHCR1-210ENST00000464012 POLDIP3Q9BY77 421 aaKnown RBP17.43■□□□□ 0.38
CCHCR1-210ENST00000464012 CENPHQ9H3R5 247 aa17.43■□□□□ 0.38
CCHCR1-210ENST00000464012 SIRT3Q9NTG7 399 aaPredicted RBP17.43■□□□□ 0.38
CCHCR1-210ENST00000464012 ATP6V1HQ9UI12 483 aa17.43■□□□□ 0.38
CCHCR1-210ENST00000464012 FOXD3Q9UJU5 478 aaPredicted RBP17.43■□□□□ 0.38
CCHCR1-210ENST00000464012 SNX8Q9Y5X2 465 aa17.43■□□□□ 0.38
CCHCR1-210ENST00000464012 MPDZO75970 2070 aa17.43■□□□□ 0.38
CCHCR1-210ENST00000464012 A0A1W2PRB8 838 aa17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 SHISA8B8ZZ34 492 aa17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 CTIFO43310 598 aaKnown RBP17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 OXSR1O95747 527 aaPredicted RBP17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 IL18BPO95998 194 aa17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 ALOX5P09917 674 aa17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 LAMP1P11279 417 aa17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 PEPDP12955 493 aa17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 DDX5P17844 614 aaKnown RBP17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 RPL3P39023 403 aaKnown RBP17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 MAP3K8P41279 467 aa17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 CPA2P48052 419 aa17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 SERPINB4P48594 390 aa17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 PRR5P85299 388 aa17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 PDCD2Q16342 344 aaPredicted RBP17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 C6orf136Q5SQH8 315 aa17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 CCNJQ5T5M9 372 aa17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 IL23RQ5VWK5 629 aa17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 ZAR1Q86SH2 424 aa17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 MEIOBQ8N635 442 aa17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 COX18Q8N8Q8 333 aa17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 HOXB13Q92826 284 aaPredicted RBP17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 FAM120BQ96EK7 910 aaKnown RBP17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 ZFP3Q96NJ6 502 aa17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 RBM24Q9BX46 236 aaKnown RBP17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 NTMQ9P121 344 aa17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 VDAC3Q9Y277 283 aa17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 ZNF337Q9Y3M9 751 aa17.42■□□□□ 0.38
CCHCR1-210ENST00000464012 OR2M5A3KFT3 312 aa17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 H0YC42 278 aa17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 HCRTR2O43614 444 aa17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 ITM2AO43736 263 aa17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 ZNF500O60304 480 aaPredicted RBP17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 CTAG2O75638 210 aa17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 KCNK2O95069 426 aa17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 TGM6O95932 706 aa17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 PRIM2P49643 509 aa17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 TPD52P55327 224 aaPredicted RBP17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 C17orf67Q0P5P2 114 aa17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 LASP1Q14847 261 aaKnown RBP17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 CHI3L2Q15782 390 aa17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 KIF18BQ86Y91 864 aa17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 KRTCAP2Q8N6L1 136 aa17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 OR6Y1Q8NGX8 325 aa17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 OR4C3Q8NH37 302 aa17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 UCN2Q96RP3 112 aa17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 PIGQQ9BRB3 760 aa17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 ACBD3Q9H3P7 528 aa17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 ZNF395Q9H8N7 513 aaPredicted RBP17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 FBXO34Q9NWN3 711 aa17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 JKAMPQ9P055 326 aa17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 AKAP9Q99996 3911 aa17.41■□□□□ 0.38
CCHCR1-210ENST00000464012 TUBAL3A6NHL2 446 aa17.4■□□□□ 0.38
CCHCR1-210ENST00000464012 SLC22A20A6NK97 555 aa17.4■□□□□ 0.38
CCHCR1-210ENST00000464012 NDUFB5O43674 189 aa17.4■□□□□ 0.38
CCHCR1-210ENST00000464012 C6orf47O95873 294 aa17.4■□□□□ 0.38
CCHCR1-210ENST00000464012 HMGN2P05204 90 aaKnown RBP17.4■□□□□ 0.38
CCHCR1-210ENST00000464012 TP53BP2Q13625 1128 aa17.4■□□□□ 0.38
CCHCR1-210ENST00000464012 MLC1Q15049 377 aa17.4■□□□□ 0.38
CCHCR1-210ENST00000464012 BCL2A1Q16548 175 aa17.4■□□□□ 0.38
CCHCR1-210ENST00000464012 SPDYE7PQ495Y7 208 aa17.4■□□□□ 0.38
CCHCR1-210ENST00000464012 CPTPQ5TA50 214 aa17.4■□□□□ 0.38
CCHCR1-210ENST00000464012 FBXW10Q5XX13 1052 aa17.4■□□□□ 0.38
CCHCR1-210ENST00000464012 ZNF781Q8N8C0 355 aa17.4■□□□□ 0.38
CCHCR1-210ENST00000464012 LINC01560Q8TB33 94 aa17.4■□□□□ 0.38
CCHCR1-210ENST00000464012 FAM222BQ8WU58 562 aa17.4■□□□□ 0.38
CCHCR1-210ENST00000464012 CDS1Q92903 461 aa17.4■□□□□ 0.38
CCHCR1-210ENST00000464012 SH3YL1Q96HL8 342 aaPredicted RBP17.4■□□□□ 0.38
CCHCR1-210ENST00000464012 PINK1Q9BXM7 581 aa17.4■□□□□ 0.38
CCHCR1-210ENST00000464012 CLEC4MQ9H2X3 399 aaPredicted RBP17.4■□□□□ 0.38
CCHCR1-210ENST00000464012 ATAD3AQ9NVI7 634 aa17.4■□□□□ 0.38
CCHCR1-210ENST00000464012 GALNT8Q9NY28 637 aa17.4■□□□□ 0.38
CCHCR1-210ENST00000464012 A0A1W2PNV4 684 aa17.39■□□□□ 0.37
CCHCR1-210ENST00000464012 A6NNC1 897 aa17.39■□□□□ 0.37
CCHCR1-210ENST00000464012 ALG1L2C9J202 215 aa17.39■□□□□ 0.37
CCHCR1-210ENST00000464012 CFLARO15519 480 aa17.39■□□□□ 0.37
CCHCR1-210ENST00000464012 SMNDC1O75940 238 aaKnown RBP eCLIP17.39■□□□□ 0.37
CCHCR1-210ENST00000464012 SERPINE1P05121 402 aa17.39■□□□□ 0.37
CCHCR1-210ENST00000464012 HPGDP15428 266 aa17.39■□□□□ 0.37
CCHCR1-210ENST00000464012 DNAJA1P31689 397 aaKnown RBP17.39■□□□□ 0.37
CCHCR1-210ENST00000464012 CPOXP36551 454 aa17.39■□□□□ 0.37
CCHCR1-210ENST00000464012 SUCLG1P53597 346 aaKnown RBP17.39■□□□□ 0.37
CCHCR1-210ENST00000464012 CLDN15P56746 228 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms