RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 OR6B1O95007 311 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 OPN1SWP03999 348 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 SEMG1P04279 462 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 ALPPP05187 535 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 C8BP07358 591 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 THBS1P07996 1170 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 NPIPA8P0DM63 369 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 ATP6V1C1P21283 382 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 ITGA3P26006 1051 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 ADH7P40394 386 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 SOX3P41225 446 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 SSR4P51571 173 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 EEF1A1P68104 462 aaKnown RBP13.18□□□□□ -0.3
COL6A1-202ENST00000463060 ELF3P78545 371 aaPredicted RBP13.18□□□□□ -0.3
COL6A1-202ENST00000463060 RHDQ02161 417 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 PLAURQ03405 335 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 GRAMD1BQ3KR37 738 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 ZNF468Q5VIY5 522 aaPredicted RBP13.18□□□□□ -0.3
COL6A1-202ENST00000463060 FNDC7Q5VTL7 733 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 DHRS4L2Q6PKH6 230 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 COMTD1Q86VU5 262 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 ZNF227Q86WZ6 799 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 ARMC8Q8IUR7 673 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 ADGRG5Q8IZF4 528 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 OR52P1PQ8NH57 321 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 TTC9Q92623 222 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 SLCO4A1Q96BD0 722 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 SPACA9Q96E40 222 aaPredicted RBP13.18□□□□□ -0.3
COL6A1-202ENST00000463060 RNF145Q96MT1 663 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 DOHHQ9BU89 302 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 SPATA5L1Q9BVQ7 753 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 ZNF552Q9H707 407 aaPredicted RBP13.18□□□□□ -0.3
COL6A1-202ENST00000463060 SH2D2AQ9NP31 389 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 STMN3Q9NZ72 180 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 IFT52Q9Y366 437 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 CFAP47Q6ZTR5 3102 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 CPAMD8Q8IZJ3 1885 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 A0A1W2PQD3 144 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 PRAMEF25A6NGN4 478 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 PRKD3O94806 890 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 OXSR1O95747 527 aaPredicted RBP13.17□□□□□ -0.3
COL6A1-202ENST00000463060 IFNA14P01570 189 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 DBIP07108 87 aaKnown RBP13.17□□□□□ -0.3
COL6A1-202ENST00000463060 UMPSP11172 480 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 NID1P14543 1247 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 ITPKBP27987 946 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 PRKAR1BP31321 381 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 KRT20P35900 424 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 DCTP40126 519 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 RFX3P48380 749 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 TMED10P49755 219 aaKnown RBP13.17□□□□□ -0.3
COL6A1-202ENST00000463060 HLCSP50747 726 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 FBXW4P57775 412 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 HPCAP84074 193 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 EFR3AQ14156 821 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 GLIPR1L2Q4G1C9 344 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 IQCCQ4KMZ1 466 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 LRRC23Q53EV4 343 aaPredicted RBP13.17□□□□□ -0.3
COL6A1-202ENST00000463060 TMEM81Q6P7N7 255 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 ENPP6Q6UWR7 440 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 TSEN54Q7Z6J9 526 aaKnown RBP13.17□□□□□ -0.3
COL6A1-202ENST00000463060 HMGN2P46Q86SG4 172 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 VRK2Q86Y07 508 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 PEX5LQ8IYB4 626 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 DND1Q8IYX4 353 aaKnown RBP13.17□□□□□ -0.3
COL6A1-202ENST00000463060 PAPD5Q8NDF8 572 aaKnown RBP13.17□□□□□ -0.3
COL6A1-202ENST00000463060 OR10Q1Q8NGQ4 319 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 SPPL2AQ8TCT8 520 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 POP5Q969H6 163 aaKnown RBP13.17□□□□□ -0.3
COL6A1-202ENST00000463060 PYURFQ96I23 114 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 NODALQ96S42 347 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 RTN4RQ9BZR6 473 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 TRIM15Q9C019 465 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 RPS6KA6Q9UK32 745 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 SAMD4AQ9UPU9 718 aaKnown RBP13.17□□□□□ -0.3
COL6A1-202ENST00000463060 DTNAQ9Y4J8 743 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 CHCHD2Q9Y6H1 151 aaPredicted RBP13.17□□□□□ -0.3
COL6A1-202ENST00000463060 IGF2RP11717 2491 aa13.17□□□□□ -0.3
COL6A1-202ENST00000463060 EPG5Q9HCE0 2579 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 CLDN24A6NM45 220 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 ALG1L2C9J202 215 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 SUV39H1O43463 412 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 ICOSLGO75144 302 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 ENTPD5O75356 428 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 LGI1O95970 557 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 FESP07332 822 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 IL12BP29460 328 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 PTGDSP41222 190 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 ST13P50502 369 aaKnown RBP13.16□□□□□ -0.3
COL6A1-202ENST00000463060 GAS1P54826 345 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 KCNJ10P78508 379 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 FGFBP1Q14512 234 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 ZNF311Q5JNZ3 666 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 PDZK1Q5T2W1 519 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 RNF220Q5VTB9 566 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 IGFL2Q6UWQ7 119 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 IL20RBQ6UXL0 311 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 VTCN1Q7Z7D3 282 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 GRAMD2AQ8IUY3 354 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 GPALPP1Q8IXQ4 340 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms