RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 CROCCP2Q86T23 111 aa8.04□□□□□ -1.12
LDB1-203ENST00000461873 MARCH3Q86UD3 253 aa8.04□□□□□ -1.12
LDB1-203ENST00000461873 GTF2IRD2Q86UP8 949 aa8.04□□□□□ -1.12
LDB1-203ENST00000461873 MISPQ8IVT2 679 aa8.04□□□□□ -1.12
LDB1-203ENST00000461873 GCNT2Q8N0V5 402 aa8.04□□□□□ -1.12
LDB1-203ENST00000461873 BANPQ8N9N5 519 aa8.04□□□□□ -1.12
LDB1-203ENST00000461873 C9orf106Q8NAJ2 232 aa8.04□□□□□ -1.12
LDB1-203ENST00000461873 RELL2Q8NC24 303 aaPredicted RBP8.04□□□□□ -1.12
LDB1-203ENST00000461873 NAXEQ8NCW5 288 aa8.04□□□□□ -1.12
LDB1-203ENST00000461873 ADAMTS15Q8TE58 950 aa8.04□□□□□ -1.12
LDB1-203ENST00000461873 CIDECQ96AQ7 238 aaPredicted RBP8.04□□□□□ -1.12
LDB1-203ENST00000461873 TUBGCP3Q96CW5 907 aa8.04□□□□□ -1.12
LDB1-203ENST00000461873 EGLN2Q96KS0 407 aa8.04□□□□□ -1.12
LDB1-203ENST00000461873 LMF2Q9BU23 707 aaKnown RBP8.04□□□□□ -1.12
LDB1-203ENST00000461873 C12orf65Q9H3J6 166 aaKnown RBP8.04□□□□□ -1.12
LDB1-203ENST00000461873 ACSS1Q9NUB1 689 aaPredicted RBP8.04□□□□□ -1.12
LDB1-203ENST00000461873 ZCCHC3Q9NUD5 404 aaKnown RBP8.04□□□□□ -1.12
LDB1-203ENST00000461873 MKS1Q9NXB0 559 aa8.04□□□□□ -1.12
LDB1-203ENST00000461873 ZNF226Q9NYT6 803 aa8.04□□□□□ -1.12
LDB1-203ENST00000461873 BAIAP2L1Q9UHR4 511 aa8.04□□□□□ -1.12
LDB1-203ENST00000461873 MCTS1Q9ULC4 181 aaKnown RBP8.04□□□□□ -1.12
LDB1-203ENST00000461873 VDAC3Q9Y277 283 aa8.04□□□□□ -1.12
LDB1-203ENST00000461873 AP4B1Q9Y6B7 739 aa8.04□□□□□ -1.12
LDB1-203ENST00000461873 A0A087WZY1 265 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 GTPBP1O00178 669 aaKnown RBP8.03□□□□□ -1.12
LDB1-203ENST00000461873 PIP5K1BO14986 540 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 LSM1O15116 133 aaKnown RBP8.03□□□□□ -1.12
LDB1-203ENST00000461873 ATP8B1O43520 1251 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 SKAP2O75563 359 aaPredicted RBP8.03□□□□□ -1.12
LDB1-203ENST00000461873 SNUPNO95149 360 aaKnown RBP8.03□□□□□ -1.12
LDB1-203ENST00000461873 FGF4P08620 206 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 ZNF708P17019 499 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 SDC1P18827 310 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 LCN1P31025 176 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 DNAJA1P31689 397 aaKnown RBP8.03□□□□□ -1.12
LDB1-203ENST00000461873 SOAT1P35610 550 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 EIF1AXP47813 144 aaKnown RBP8.03□□□□□ -1.12
LDB1-203ENST00000461873 LHX2P50458 406 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 GFRA1P56159 465 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 DLX5P56178 289 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 CTBP2P56545 445 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 POU6F2P78424 691 aaPredicted RBP8.03□□□□□ -1.12
LDB1-203ENST00000461873 GLYR1Q49A26 553 aaPredicted RBP8.03□□□□□ -1.12
LDB1-203ENST00000461873 RFTN2Q52LD8 501 aaPredicted RBP8.03□□□□□ -1.12
LDB1-203ENST00000461873 FAM219BQ5XKK7 198 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 FIGNL1Q6PIW4 674 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 RNF165Q6ZSG1 346 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 STK32CQ86UX6 486 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 TRABD2AQ86V40 505 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 WDR75Q8IWA0 830 aaKnown RBP8.03□□□□□ -1.12
LDB1-203ENST00000461873 ZNF614Q8N883 585 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 ACBD4Q8NC06 268 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 VPS37AQ8NEZ2 397 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 OR2M3Q8NG83 312 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 OR56A1Q8NGH5 318 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 LINC01560Q8TB33 94 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 FBXO30Q8TB52 745 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 PIK3R3Q92569 461 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 MOAP1Q96BY2 351 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 C11orf24Q96F05 449 aaPredicted RBP8.03□□□□□ -1.12
LDB1-203ENST00000461873 ZNF764Q96H86 408 aaPredicted RBP8.03□□□□□ -1.12
LDB1-203ENST00000461873 ZNF845Q96IR2 970 aaPredicted RBP8.03□□□□□ -1.12
LDB1-203ENST00000461873 DACH2Q96NX9 599 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 SH3GL2Q99962 352 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 PAIP2Q9BPZ3 127 aaKnown RBP8.03□□□□□ -1.12
LDB1-203ENST00000461873 PINK1Q9BXM7 581 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 HOXD1Q9GZZ0 328 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 VIPAS39Q9H9C1 493 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 TMBIM4Q9HC24 238 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 KCNK9Q9NPC2 374 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 TIGARQ9NQ88 270 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 UBQLN4Q9NRR5 601 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 RASSF1Q9NS23 344 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 PROCRQ9UNN8 238 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 EMC9Q9Y3B6 208 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 DNAJC15Q9Y5T4 150 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 DOCK7Q96N67 2140 aa8.03□□□□□ -1.12
LDB1-203ENST00000461873 APCP25054 2843 aa8.02□□□□□ -1.12
LDB1-203ENST00000461873 ABCA12Q86UK0 2595 aa8.02□□□□□ -1.13
LDB1-203ENST00000461873 SH3D21A4FU49 640 aa8.02□□□□□ -1.13
LDB1-203ENST00000461873 DUXAA6NLW8 204 aa8.02□□□□□ -1.13
LDB1-203ENST00000461873 GJE1A6NN92 205 aa8.02□□□□□ -1.13
LDB1-203ENST00000461873 NPIPB8E9PQR5 432 aa8.02□□□□□ -1.13
LDB1-203ENST00000461873 EIF1AYO14602 144 aaKnown RBP8.02□□□□□ -1.13
LDB1-203ENST00000461873 MSTNO14793 375 aa8.02□□□□□ -1.13
LDB1-203ENST00000461873 FADS1O60427 444 aa8.02□□□□□ -1.13
LDB1-203ENST00000461873 TBX19O60806 448 aa8.02□□□□□ -1.13
LDB1-203ENST00000461873 TNFRSF21O75509 655 aa8.02□□□□□ -1.13
LDB1-203ENST00000461873 CHRNGP07510 517 aa8.02□□□□□ -1.13
LDB1-203ENST00000461873 PABPC4LP0CB38 370 aaKnown RBP8.02□□□□□ -1.13
LDB1-203ENST00000461873 BCKDHAP12694 445 aa8.02□□□□□ -1.13
LDB1-203ENST00000461873 POU2F1P14859 743 aa8.02□□□□□ -1.13
LDB1-203ENST00000461873 CREB1P16220 341 aa8.02□□□□□ -1.13
LDB1-203ENST00000461873 PRPS1L1P21108 318 aa8.02□□□□□ -1.13
LDB1-203ENST00000461873 EIF1P41567 113 aaKnown RBP8.02□□□□□ -1.13
LDB1-203ENST00000461873 CCT3P49368 545 aaKnown RBP8.02□□□□□ -1.13
LDB1-203ENST00000461873 SIRPAP78324 504 aa8.02□□□□□ -1.13
LDB1-203ENST00000461873 KIAA0040Q15053 153 aa8.02□□□□□ -1.13
LDB1-203ENST00000461873 PON3Q15166 354 aa8.02□□□□□ -1.13
LDB1-203ENST00000461873 PGS1Q32NB8 556 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms