RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 NAF1Q96HR8 494 aaKnown RBP15.33■□□□□ 0.04
LINC00963-208ENST00000454968 HSH2DQ96JZ2 352 aa15.33■□□□□ 0.04
LINC00963-208ENST00000454968 LIN28AQ9H9Z2 209 aaKnown RBP15.33■□□□□ 0.04
LINC00963-208ENST00000454968 IL1RAPQ9NPH3 570 aa15.33■□□□□ 0.04
LINC00963-208ENST00000454968 ATP13A2Q9NQ11 1180 aa15.33■□□□□ 0.04
LINC00963-208ENST00000454968 UBQLN4Q9NRR5 601 aa15.33■□□□□ 0.04
LINC00963-208ENST00000454968 SEC14L3Q9UDX4 400 aa15.33■□□□□ 0.04
LINC00963-208ENST00000454968 ANGPTL2Q9UKU9 493 aa15.33■□□□□ 0.04
LINC00963-208ENST00000454968 YARS2Q9Y2Z4 477 aaKnown RBP15.33■□□□□ 0.04
LINC00963-208ENST00000454968 WWP2O00308 870 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 NKX2-8O15522 239 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 UGT2B11O75310 529 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 OR2J2O76002 312 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 FESP07332 822 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 RAP2AP10114 183 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 ATP6V1C1P21283 382 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 DCTP40126 519 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 ERFP50548 548 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 PLCXD2Q0VAA5 305 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 FGFBP1Q14512 234 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 GPR68Q15743 365 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 NTRK2Q16620 822 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 ZSWIM7Q19AV6 140 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 TMEM81Q6P7N7 255 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 TSEN54Q7Z6J9 526 aaKnown RBP15.32■□□□□ 0.04
LINC00963-208ENST00000454968 VTCN1Q7Z7D3 282 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 RPS19BP1Q86WX3 136 aaKnown RBP15.32■□□□□ 0.04
LINC00963-208ENST00000454968 GRAMD2AQ8IUY3 354 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 CMIPQ8IY22 773 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 DND1Q8IYX4 353 aaKnown RBP15.32■□□□□ 0.04
LINC00963-208ENST00000454968 SLC5A8Q8N695 610 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 FAM71CQ8NEG0 241 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 SLC22A8Q8TCC7 542 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 PYDC1Q8WXC3 89 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 LZICQ8WZA0 190 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 TTC9Q92623 222 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 SLC35B4Q969S0 331 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 EFHD2Q96C19 240 aaPredicted RBP15.32■□□□□ 0.04
LINC00963-208ENST00000454968 RSRC1Q96IZ7 334 aaKnown RBP15.32■□□□□ 0.04
LINC00963-208ENST00000454968 ZNF354BQ96LW1 612 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 CCNL2Q96S94 520 aaPredicted RBP15.32■□□□□ 0.04
LINC00963-208ENST00000454968 DCLRE1BQ9H816 532 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 ZNF443Q9Y2A4 671 aaPredicted RBP15.32■□□□□ 0.04
LINC00963-208ENST00000454968 HEATR5AQ86XA9 2040 aa15.32■□□□□ 0.04
LINC00963-208ENST00000454968 A0A1W2PQD3 144 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 CDHR4A6H8M9 788 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 FADS1O60427 444 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 ITGA10O75578 1167 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 KRT36O76013 467 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 ZNF682O95780 498 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 CYP4B1P13584 511 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 TMED10P49755 219 aaKnown RBP15.31■□□□□ 0.04
LINC00963-208ENST00000454968 CDC20Q12834 499 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 EFR3AQ14156 821 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 NRF1Q16656 503 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 GLIPR1L2Q4G1C9 344 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 LIN52Q52LA3 116 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 FAM98BQ52LJ0 330 aaKnown RBP15.31■□□□□ 0.04
LINC00963-208ENST00000454968 ZNF311Q5JNZ3 666 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 ATP1A1-AS1Q5TC04 95 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 NUP54Q7Z3B4 507 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 VRK2Q86Y07 508 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 PRR22Q8IZ63 422 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 SMYD1Q8NB12 490 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 THAP3Q8WTV1 239 aaPredicted RBP15.31■□□□□ 0.04
LINC00963-208ENST00000454968 ADOQ96SZ5 270 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 ARHGDIGQ99819 225 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 LHPPQ9H008 270 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 EVA1AQ9H8M9 152 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 TRIM45Q9H8W5 580 aaPredicted RBP15.31■□□□□ 0.04
LINC00963-208ENST00000454968 SH2D2AQ9NP31 389 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 AP4S1Q9Y587 144 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 IGF2RP11717 2491 aa15.31■□□□□ 0.04
LINC00963-208ENST00000454968 URB1O60287 2271 aaKnown RBP15.3■□□□□ 0.04
LINC00963-208ENST00000454968 EML6Q6ZMW3 1958 aa15.3■□□□□ 0.04
LINC00963-208ENST00000454968 ALG1L2C9J202 215 aa15.3■□□□□ 0.04
LINC00963-208ENST00000454968 MAN1A2O60476 641 aa15.3■□□□□ 0.04
LINC00963-208ENST00000454968 DPM1O60762 260 aa15.3■□□□□ 0.04
LINC00963-208ENST00000454968 REM1O75628 298 aa15.3■□□□□ 0.04
LINC00963-208ENST00000454968 UTS2O95399 124 aa15.3■□□□□ 0.04
LINC00963-208ENST00000454968 OXSR1O95747 527 aaPredicted RBP15.3■□□□□ 0.04
LINC00963-208ENST00000454968 EIF2S3P41091 472 aaKnown RBP15.3■□□□□ 0.04
LINC00963-208ENST00000454968 RRADP55042 308 aa15.3■□□□□ 0.04
LINC00963-208ENST00000454968 KCNC4Q03721 635 aa15.3■□□□□ 0.04
LINC00963-208ENST00000454968 CHRNB3Q05901 458 aa15.3■□□□□ 0.04
LINC00963-208ENST00000454968 LARS2Q15031 903 aaKnown RBP15.3■□□□□ 0.04
LINC00963-208ENST00000454968 GRAMD1BQ3KR37 738 aa15.3■□□□□ 0.04
LINC00963-208ENST00000454968 IFI44LQ53G44 452 aa15.3■□□□□ 0.04
LINC00963-208ENST00000454968 APOOLQ6UXV4 268 aa15.3■□□□□ 0.04
LINC00963-208ENST00000454968 ZNF836Q6ZNA1 936 aa15.3■□□□□ 0.04
LINC00963-208ENST00000454968 OR10Q1Q8NGQ4 319 aa15.3■□□□□ 0.04
LINC00963-208ENST00000454968 BRIX1Q8TDN6 353 aaKnown RBP15.3■□□□□ 0.04
LINC00963-208ENST00000454968 GEMIN6Q8WXD5 167 aaKnown RBP15.3■□□□□ 0.04
LINC00963-208ENST00000454968 STMN2Q93045 179 aa15.3■□□□□ 0.04
LINC00963-208ENST00000454968 SPACA9Q96E40 222 aaPredicted RBP15.3■□□□□ 0.04
LINC00963-208ENST00000454968 SLC47A1Q96FL8 570 aa15.3■□□□□ 0.04
LINC00963-208ENST00000454968 SECISBP2Q96T21 854 aaKnown RBP15.3■□□□□ 0.04
LINC00963-208ENST00000454968 CHID1Q9BWS9 393 aa15.3■□□□□ 0.04
LINC00963-208ENST00000454968 RNPEPL1Q9HAU8 725 aa15.3■□□□□ 0.04
LINC00963-208ENST00000454968 FLRT3Q9NZU0 649 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms