RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 MZT2AQ6P582 158 aa13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 TMEM64Q6YI46 380 aa13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 PELI3Q8N2H9 469 aa13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 FAM86B1Q8N7N1 296 aa13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 NETO1Q8TDF5 533 aa13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 SLC45A3Q96JT2 553 aa13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 CCM2LQ9NUG4 571 aaPredicted RBP13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 SH3BGRL2Q9UJC5 107 aa13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 SPINT1O43278 529 aa13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 FRS3O43559 492 aa13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 FMO6PO60774 539 aa13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 CYB5AP00167 134 aa13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 POU3F3P20264 500 aaPredicted RBP13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 CDH11P55287 796 aa13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 DNASE1L3Q13609 305 aa13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 SYPL1Q16563 259 aa13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 LAPTM4BQ86VI4 370 aa13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 OR4D9Q8NGE8 314 aa13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 NXPE2Q96DL1 559 aa13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 C16orf58Q96GQ5 468 aa13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 OR4K3Q96R72 315 aa13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 CDCP1Q9H5V8 836 aa13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 MAGIXQ9H6Y5 334 aa13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 DDX31Q9H8H2 851 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 ZNF160Q9HCG1 818 aa13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 ABCB10Q9NRK6 738 aa13.18□□□□□ -0.3
SMARCA4-204ENST00000444061 SULT2B1O00204 365 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 SNPHO15079 494 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 ALDH3A2P51648 485 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 PPP3R1P63098 170 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 DSG2Q14126 1118 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 SGCAQ16586 387 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 ZNF750Q32MQ0 723 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 SPRED1Q7Z699 444 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 KRT77Q7Z794 578 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 LNX2Q8N448 690 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 OR2T33Q8NG76 320 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 PSMA8Q8TAA3 256 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 KCNE4Q8WWG9 221 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 ORAI3Q9BRQ5 295 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 CD320Q9NPF0 282 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 RIMS3Q9UJD0 308 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 PCDHGA7Q9Y5G6 932 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 GMEB1Q9Y692 573 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 A0A1W2PR48 441 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 SELENOVP59797 346 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 SELENOWP63302 87 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 SLC27A4Q6P1M0 643 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 KLHL17Q6TDP4 642 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 CARFQ8N187 725 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 OR1J4Q8NGS1 313 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 UBASH3BQ8TF42 649 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 HPS1Q92902 700 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 TRNT1Q96Q11 434 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 NODALQ96S42 347 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 GINS4Q9BRT9 223 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 PIGUQ9H490 435 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 CCDC182A6NF36 153 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 KLRC4-KLRK1H3BQV0 150 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 GKN3PP0CG01 181 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 HTR3AP46098 478 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 GCGRP47871 477 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 ATP12AP54707 1039 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 AQP4P55087 323 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 TLE3Q04726 772 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 COX10Q12887 443 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 LCN8Q6JVE9 175 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 CHERPQ8IWX8 916 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 PARP8Q8N3A8 854 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 ZNF433Q8N7K0 673 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 OR4K5Q8NGD3 323 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 THEM6Q8WUY1 208 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 PMM1Q92871 262 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 WDR77Q9BQA1 342 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 LIN28AQ9H9Z2 209 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 MGAMO43451 1857 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 RIF1Q5UIP0 2472 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 TPRP12270 2363 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 PRAMEF10O60809 474 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 OXSR1O95747 527 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 TNFRSF1BP20333 461 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 PSMA1P25786 263 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 PDX1P52945 283 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 EEF1A1P5Q5VTE0 462 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 PRAMEF8Q5VWM4 474 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 PRAMEF7Q5VXH5 474 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 SATL1Q86VE3 508 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 DTWD1Q8N5C7 304 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 SIRT6Q8N6T7 355 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 DRAXINQ8NBI3 349 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 C8orf44Q96CB5 159 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 ELP4Q96EB1 424 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 TBCCD1Q9NVR7 557 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 ZSWIM8A7E2V4 1837 aa13.17□□□□□ -0.3
SMARCA4-204ENST00000444061 IGHV5-51A0A0C4DH38 117 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 OR2A25A4D2G3 310 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 ZNF670-ZNF695F2Z2N8 137 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 GAPDHSO14556 408 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 JRKO75564 520 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 ZGLP1P0C6A0 271 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms