RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 C12orf71A8MTZ7 269 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 OR3A3P47888 321 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 TGM4P49221 684 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 RUNX2Q13950 521 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 GNA13Q14344 377 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 SHISA5Q8N114 240 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 LMX1AQ8TE12 382 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 SNAPC3Q92966 411 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 RNF31Q96EP0 1072 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 SLC22A4Q9H015 551 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 NMNAT1Q9HAN9 279 aaPredicted RBP13.23□□□□□ -0.29
LIMD1-202ENST00000440097 STMN3Q9NZ72 180 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 SLC13A4Q9UKG4 626 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 DAPP1Q9UN19 280 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 POFUT2Q9Y2G5 429 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 KCNE3Q9Y6H6 103 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 OR10H3O60404 316 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 LDB3O75112 727 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 ZNF780AO75290 641 aaPredicted RBP13.23□□□□□ -0.29
LIMD1-202ENST00000440097 KCNJ5P48544 419 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 RPL6Q02878 288 aaKnown RBP13.23□□□□□ -0.29
LIMD1-202ENST00000440097 LSRQ86X29 649 aaPredicted RBP13.23□□□□□ -0.29
LIMD1-202ENST00000440097 OR5T3Q8NGG3 340 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 OR4C15Q8NGM1 316 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 SFXN5Q8TD22 340 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 ADAMTS15Q8TE58 950 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 MOAP1Q96BY2 351 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 TM4SF19Q96DZ7 209 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 OR7D2Q96RA2 312 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 SPATA5L1Q9BVQ7 753 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 GON7Q9BXV9 100 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 IMPAD1Q9NX62 359 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 PILRAQ9UKJ1 303 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 BDP1A6H8Y1 2624 aa13.23□□□□□ -0.29
LIMD1-202ENST00000440097 WDFY3Q8IZQ1 3526 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 TRBV4-1A0A0J9YWV2 114 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 OR5K3A6NET4 321 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 CHURC1-FNTBB4DL54 471 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 CSF2P04141 144 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 CHRM4P08173 479 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 MYL9P24844 172 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 CD38P28907 300 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 SCN1BQ07699 218 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 PIN1Q13526 163 aaPredicted RBP13.22□□□□□ -0.29
LIMD1-202ENST00000440097 EFR3AQ14156 821 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 CACTIN-AS1Q8N1I8 211 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 WDR36Q8NI36 951 aaKnown RBP13.22□□□□□ -0.29
LIMD1-202ENST00000440097 ZNF681Q96N22 645 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 SNTG1Q9NSN8 517 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 TMEM74BQ9NUR3 256 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 SLC9A8Q9Y2E8 581 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 FAM221BA6H8Z2 402 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 B4DXG7 233 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 FFAR1O14842 300 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 IL9P15248 144 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 ST6GAL1P15907 406 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 SHC2P98077 582 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 MLLT1Q03111 559 aaPredicted RBP13.22□□□□□ -0.29
LIMD1-202ENST00000440097 ELOCQ15369 112 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 DCST1Q5T197 706 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 TCTN3Q6NUS6 607 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 CCDC28AQ8IWP9 274 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 UBE2J2Q8N2K1 259 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 FAM109AQ8N4B1 249 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 SPERTQ8NA61 448 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 C9orf43Q8TAL5 461 aaPredicted RBP13.22□□□□□ -0.29
LIMD1-202ENST00000440097 BBS10Q8TAM1 723 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 C11orf54Q9H0W9 315 aaPredicted RBP13.22□□□□□ -0.29
LIMD1-202ENST00000440097 KCMF1Q9P0J7 381 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 ABCA7Q8IZY2 2146 aa13.22□□□□□ -0.29
LIMD1-202ENST00000440097 SDC3O75056 442 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 H1F0P07305 194 aaKnown RBP13.21□□□□□ -0.29
LIMD1-202ENST00000440097 NUDT1P36639 197 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 PSPHP78330 225 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 VWA5B2Q8N398 1253 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 OR7G2Q8NG99 324 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 OR4D11Q8NGI4 311 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 ZFAND1Q8TCF1 268 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 KLHL6Q8WZ60 621 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 TAPBPLQ9BX59 468 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 CAPN10Q9HC96 672 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 SATB2Q9UPW6 733 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 PRELID1Q9Y255 219 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 SPTBP11277 2137 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 SEMA7AO75326 666 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 GASTP01350 101 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 SOX3P41225 446 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 MLLT3P42568 568 aaPredicted RBP13.21□□□□□ -0.29
LIMD1-202ENST00000440097 HOXC5Q00444 222 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 FAPQ12884 760 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 ASAH1Q13510 395 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 FAM111BQ6SJ93 734 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 PAMR1Q6UXH9 720 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 BPHLQ86WA6 291 aaPredicted RBP13.21□□□□□ -0.29
LIMD1-202ENST00000440097 SAMD14Q8IZD0 417 aaPredicted RBP13.21□□□□□ -0.29
LIMD1-202ENST00000440097 RDH10Q8IZV5 341 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 MAP6Q96JE9 813 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 FRMD6Q96NE9 622 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 OPALINQ96PE5 141 aa13.21□□□□□ -0.29
LIMD1-202ENST00000440097 SLC38A3Q99624 504 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms