RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 SFXN2Q96NB2 322 aa22.47■■□□□ 1.19
RAPGEF1-206ENST00000438647 DSN1Q9H410 356 aa22.47■■□□□ 1.19
RAPGEF1-206ENST00000438647 VIPAS39Q9H9C1 493 aa22.47■■□□□ 1.19
RAPGEF1-206ENST00000438647 GPATCH2Q9NW75 528 aa22.47■■□□□ 1.19
RAPGEF1-206ENST00000438647 CELSR2Q9HCU4 2923 aa22.46■■□□□ 1.19
RAPGEF1-206ENST00000438647 ALG1L2C9J202 215 aa22.46■■□□□ 1.19
RAPGEF1-206ENST00000438647 ANKRD28O15084 1053 aa22.46■■□□□ 1.19
RAPGEF1-206ENST00000438647 ANGPTL1O95841 491 aa22.46■■□□□ 1.19
RAPGEF1-206ENST00000438647 EPPINO95925 133 aa22.46■■□□□ 1.19
RAPGEF1-206ENST00000438647 COX6B1P14854 86 aa22.46■■□□□ 1.19
RAPGEF1-206ENST00000438647 HPGDP15428 266 aa22.46■■□□□ 1.19
RAPGEF1-206ENST00000438647 EPHA3P29320 983 aa22.46■■□□□ 1.19
RAPGEF1-206ENST00000438647 GFRA1P56159 465 aa22.46■■□□□ 1.19
RAPGEF1-206ENST00000438647 RCAN2Q14206 197 aa22.46■■□□□ 1.19
RAPGEF1-206ENST00000438647 MARCH3Q86UD3 253 aa22.46■■□□□ 1.19
RAPGEF1-206ENST00000438647 OR2M3Q8NG83 312 aa22.46■■□□□ 1.19
RAPGEF1-206ENST00000438647 DUSP19Q8WTR2 217 aa22.46■■□□□ 1.19
RAPGEF1-206ENST00000438647 ZNF75CPQ92670 426 aaPredicted RBP22.46■■□□□ 1.19
RAPGEF1-206ENST00000438647 KCNJ16Q9NPI9 418 aa22.46■■□□□ 1.19
RAPGEF1-206ENST00000438647 UBQLN4Q9NRR5 601 aa22.46■■□□□ 1.19
RAPGEF1-206ENST00000438647 AIG1Q9NVV5 245 aa22.46■■□□□ 1.19
RAPGEF1-206ENST00000438647 A0A0G2JNJ9 132 aa22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 PRSS51A0A1B0GVH4 220 aa22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 HSPB2A8KAH6 182 aa22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 E9PBE3 544 aa22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 OXSR1O95747 527 aaPredicted RBP22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 CPN1P15169 458 aa22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 H2AFXP16104 143 aaPredicted RBP22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 ATP6V1C1P21283 382 aa22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 TBXA2RP21731 343 aa22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 CHMP24386 653 aa22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 WNT3P56703 355 aa22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 HSPB2Q16082 182 aa22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 DCST1Q5T197 706 aa22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 GALNT10Q86SR1 603 aa22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 CLECL1Q8IZS7 167 aa22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 OR4A15Q8NGL6 344 aa22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 OR5AK3PQ8NH89 298 aa22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 CDS1Q92903 461 aa22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 OTUB1Q96FW1 271 aaPredicted RBP22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 WDR55Q9H6Y2 383 aaPredicted RBP22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 MED11Q9P086 117 aa22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 Q9UFV3 132 aa22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 ADGRG4Q8IZF6 3080 aa22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 NUP214P35658 2090 aaPredicted RBP22.45■■□□□ 1.18
RAPGEF1-206ENST00000438647 IGLV3-32A0A0A0MS00 114 aa22.44■■□□□ 1.18
RAPGEF1-206ENST00000438647 GOLGA8QA0A0J9YX86 632 aa22.44■■□□□ 1.18
RAPGEF1-206ENST00000438647 GOLGA8OA6NCC3 632 aa22.44■■□□□ 1.18
RAPGEF1-206ENST00000438647 FAM90A27PA6NNH2 459 aa22.44■■□□□ 1.18
RAPGEF1-206ENST00000438647 GOLGA8NF8WBI6 632 aa22.44■■□□□ 1.18
RAPGEF1-206ENST00000438647 SCDO00767 359 aa22.44■■□□□ 1.18
RAPGEF1-206ENST00000438647 NDUFB5O43674 189 aa22.44■■□□□ 1.18
RAPGEF1-206ENST00000438647 ZIC3O60481 467 aa22.44■■□□□ 1.18
RAPGEF1-206ENST00000438647 ALDOCP09972 364 aaKnown RBP22.44■■□□□ 1.18
RAPGEF1-206ENST00000438647 TIMP3P35625 211 aa22.44■■□□□ 1.18
RAPGEF1-206ENST00000438647 ADH7P40394 386 aa22.44■■□□□ 1.18
RAPGEF1-206ENST00000438647 TTMPQ5BVD1 217 aa22.44■■□□□ 1.18
RAPGEF1-206ENST00000438647 NSUN5P2Q63ZY6 315 aa22.44■■□□□ 1.18
RAPGEF1-206ENST00000438647 NXNQ6DKJ4 435 aa22.44■■□□□ 1.18
RAPGEF1-206ENST00000438647 MISPQ8IVT2 679 aa22.44■■□□□ 1.18
RAPGEF1-206ENST00000438647 OR4C3Q8NH37 302 aa22.44■■□□□ 1.18
RAPGEF1-206ENST00000438647 ZPLD1Q8TCW7 415 aa22.44■■□□□ 1.18
RAPGEF1-206ENST00000438647 ZBTB18Q99592 522 aa22.44■■□□□ 1.18
RAPGEF1-206ENST00000438647 SH3GL2Q99962 352 aa22.44■■□□□ 1.18
RAPGEF1-206ENST00000438647 RTN4RQ9BZR6 473 aa22.44■■□□□ 1.18
RAPGEF1-206ENST00000438647 RPH3AQ9Y2J0 694 aaPredicted RBP22.44■■□□□ 1.18
RAPGEF1-206ENST00000438647 RNF103-CHMP3A0A140T963 221 aa22.43■■□□□ 1.18
RAPGEF1-206ENST00000438647 CD8B2A6NJW9 211 aa22.43■■□□□ 1.18
RAPGEF1-206ENST00000438647 DUXAA6NLW8 204 aa22.43■■□□□ 1.18
RAPGEF1-206ENST00000438647 C17orf51A8MQB3 221 aa22.43■■□□□ 1.18
RAPGEF1-206ENST00000438647 HMGB1P1B2RPK0 211 aaPredicted RBP22.43■■□□□ 1.18
RAPGEF1-206ENST00000438647 B4DXG7 233 aa22.43■■□□□ 1.18
RAPGEF1-206ENST00000438647 HK1P19367 917 aa22.43■■□□□ 1.18
RAPGEF1-206ENST00000438647 S100A3P33764 101 aa22.43■■□□□ 1.18
RAPGEF1-206ENST00000438647 FAM174BQ3ZCQ3 159 aa22.43■■□□□ 1.18
RAPGEF1-206ENST00000438647 SPANXN4Q5MJ08 99 aa22.43■■□□□ 1.18
RAPGEF1-206ENST00000438647 CCNJQ5T5M9 372 aa22.43■■□□□ 1.18
RAPGEF1-206ENST00000438647 APOOLQ6UXV4 268 aa22.43■■□□□ 1.18
RAPGEF1-206ENST00000438647 LRRC8CQ8TDW0 803 aa22.43■■□□□ 1.18
RAPGEF1-206ENST00000438647 ACTRT2Q8TDY3 377 aa22.43■■□□□ 1.18
RAPGEF1-206ENST00000438647 C1GALT1C1Q96EU7 318 aa22.43■■□□□ 1.18
RAPGEF1-206ENST00000438647 MAELQ96JY0 434 aaKnown RBP22.43■■□□□ 1.18
RAPGEF1-206ENST00000438647 HOXD1Q9GZZ0 328 aa22.43■■□□□ 1.18
RAPGEF1-206ENST00000438647 CALHM2Q9HA72 323 aa22.43■■□□□ 1.18
RAPGEF1-206ENST00000438647 NOTCH2Q04721 2471 aa22.43■■□□□ 1.18
RAPGEF1-206ENST00000438647 H0Y3Z8 333 aa22.42■■□□□ 1.18
RAPGEF1-206ENST00000438647 C19orf84I3L1E1 186 aa22.42■■□□□ 1.18
RAPGEF1-206ENST00000438647 LINC01387J3KSC0 135 aa22.42■■□□□ 1.18
RAPGEF1-206ENST00000438647 SCN2BO60939 215 aa22.42■■□□□ 1.18
RAPGEF1-206ENST00000438647 IL2RAP01589 272 aa22.42■■□□□ 1.18
RAPGEF1-206ENST00000438647 IDO1P14902 403 aa22.42■■□□□ 1.18
RAPGEF1-206ENST00000438647 MSX1P28360 303 aa22.42■■□□□ 1.18
RAPGEF1-206ENST00000438647 SLC25A35Q3KQZ1 300 aa22.42■■□□□ 1.18
RAPGEF1-206ENST00000438647 DCST2Q5T1A1 773 aa22.42■■□□□ 1.18
RAPGEF1-206ENST00000438647 RAET1LQ5VY80 246 aa22.42■■□□□ 1.18
RAPGEF1-206ENST00000438647 SEM1Q6ZVN7 128 aa22.42■■□□□ 1.18
RAPGEF1-206ENST00000438647 C6orf120Q7Z4R8 191 aa22.42■■□□□ 1.18
RAPGEF1-206ENST00000438647 ANKRD46Q86W74 232 aa22.42■■□□□ 1.18
RAPGEF1-206ENST00000438647 ZNF527Q8NB42 609 aa22.42■■□□□ 1.18
RAPGEF1-206ENST00000438647 GLB1L3Q8NCI6 653 aaPredicted RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms