RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 SLC10A1Q14973 349 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 CES4AQ5XG92 561 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 AGTRAPQ6RW13 159 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 OR4C5Q8NGB2 326 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 OR4D6Q8NGJ1 314 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 ZFP90Q8TF47 636 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 ZNF582Q96NG8 517 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-209ENST00000437951 CMSS1Q9BQ75 279 aaKnown RBP10.95□□□□□ -0.66
PTCH1-209ENST00000437951 SEMA6CQ9H3T2 930 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 ZCCHC4Q9H5U6 513 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 SIAEQ9HAT2 523 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 CDK5RAP2Q96SN8 1893 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 PCGF2P35227 344 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 ARL2P36404 184 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 NAA10P41227 235 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-209ENST00000437951 BDKRB1P46663 353 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 ABHD15Q6UXT9 468 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 MAMDC2Q7Z304 686 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-209ENST00000437951 NHLRC2Q8NBF2 726 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 NUP43Q8NFH3 380 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 PRAP1Q96NZ9 151 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 PUS1Q9Y606 427 aaKnown RBP eCLIP10.95□□□□□ -0.66
PTCH1-209ENST00000437951 SEC14L6B5MCN3 397 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 SCAMP2O15127 329 aaKnown RBP10.95□□□□□ -0.66
PTCH1-209ENST00000437951 CSTAP01040 98 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 HCCSP53701 268 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 ERVFC1P60507 584 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 SUMO1P63165 101 aaKnown RBP10.95□□□□□ -0.66
PTCH1-209ENST00000437951 ZNF691Q5VV52 312 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 CATSPERGQ6ZRH7 1159 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-209ENST00000437951 OR52P1PQ8NH57 321 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 HERVK_113Q902F9 699 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 PCED1BQ96HM7 432 aa10.95□□□□□ -0.66
PTCH1-209ENST00000437951 PAPOLGQ9BWT3 736 aaKnown RBP10.95□□□□□ -0.66
PTCH1-209ENST00000437951 SDHDO14521 159 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 SOCS5O75159 536 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 GABRA5P31644 462 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 BEX3Q00994 111 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 SNTB1Q13884 538 aaKnown RBP10.94□□□□□ -0.66
PTCH1-209ENST00000437951 PPP1R3AQ16821 1122 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 CXCL17Q6UXB2 119 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 USB1Q9BQ65 265 aaKnown RBP10.94□□□□□ -0.66
PTCH1-209ENST00000437951 SMIM28A0A1B0GU29 152 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 ZNF587BE7ETH6 402 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 ADAM23O75077 832 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 POLR2CP19387 275 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-209ENST00000437951 PSMB3P49720 205 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 MLLT10P55197 1068 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 PPP1R8Q12972 351 aaKnown RBP10.94□□□□□ -0.66
PTCH1-209ENST00000437951 MIB2Q96AX9 1013 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 SLC25A32Q9H2D1 315 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 NDRG2Q9UN36 371 aaKnown RBP10.94□□□□□ -0.66
PTCH1-209ENST00000437951 OR1D2P34982 312 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 FASLGP48023 281 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 CCL23P55773 120 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 TNK1Q13470 666 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 SPCS2Q15005 226 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 LRIT3Q3SXY7 679 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 PHF19Q5T6S3 580 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 CNKSR3Q6P9H4 555 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 CORO6Q6QEF8 472 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 LRRC25Q8N386 305 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-209ENST00000437951 GAB3Q8WWW8 586 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 YIPF5Q969M3 257 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 SGK3Q96BR1 496 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 AGPAT4Q9NRZ5 378 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 TMEM200CA6NKL6 621 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 ANKRD66B4E2M5 251 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 SNNO75324 88 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-209ENST00000437951 CCNOP22674 350 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 SERPINA12Q8IW75 414 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 GCNT2Q8N0V5 402 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 WDR20Q8TBZ3 569 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 FAM122AQ96E09 287 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 ZNF251Q9BRH9 671 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 ZNF586Q9NXT0 402 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 DIP2BQ9P265 1576 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 TAC3Q9UHF0 121 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 HRH3Q9Y5N1 445 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 ETV7Q9Y603 341 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 BAZ2AQ9UIF9 1905 aaKnown RBP10.94□□□□□ -0.66
PTCH1-209ENST00000437951 A0A1W2PQ09 198 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 HPGDSO60760 199 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 SERPINA5P05154 406 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 PRDX3P30048 256 aaKnown RBP10.94□□□□□ -0.66
PTCH1-209ENST00000437951 BRCC3P46736 316 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 MPEG1Q2M385 716 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 TECRLQ5HYJ1 363 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 FIGNL1Q6PIW4 674 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 NPAS4Q8IUM7 802 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 OR6F1Q8NGZ6 308 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 TRMT2BQ96GJ1 504 aaKnown RBP10.94□□□□□ -0.66
PTCH1-209ENST00000437951 FEVQ99581 238 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 PDZD7Q9H5P4 517 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 NDRG3Q9UGV2 375 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 V9GY05 133 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 KLK3P07288 261 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-209ENST00000437951 UBL4AP11441 157 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 TAF9Q16594 264 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms