RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 GSK3BP49841 420 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 MTHFSP49914 203 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 PDZK1IP1Q13113 114 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 TRIP4Q15650 581 aaPredicted RBP5.05□□□□□ -1.6
PTPN4-203ENST00000430976 BAK1Q16611 211 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 CDNFQ49AH0 187 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 SOHLH1Q5JUK2 328 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 PUSL1Q8N0Z8 303 aaKnown RBP5.05□□□□□ -1.6
PTPN4-203ENST00000430976 TXNDC5Q8NBS9 432 aaKnown RBP5.05□□□□□ -1.6
PTPN4-203ENST00000430976 SDR9C7Q8NEX9 313 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 ABHD11Q8NFV4 315 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 RPL3LQ92901 407 aaKnown RBP5.05□□□□□ -1.6
PTPN4-203ENST00000430976 SORCS2Q96PQ0 1159 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 TMEM47Q9BQJ4 181 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 IL26Q9NPH9 171 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 IMP3Q9NV31 184 aaKnown RBP5.05□□□□□ -1.6
PTPN4-203ENST00000430976 C1orf109Q9NX04 203 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 SLC17A6Q9P2U8 582 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 PADI3Q9ULW8 664 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 CCDC141Q6ZP82 1450 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 SHANK2Q9UPX8 1470 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 BCORL1Q5H9F3 1711 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 ABCA7Q8IZY2 2146 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 KIAA0232Q92628 1395 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 NCANO14594 1321 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 MYH10P35580 1976 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 FAM95CA0A1B0GW59 222 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 RNF212BA8MTL3 300 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 METTL12A8MUP2 240 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 TMEM233B4DJY2 109 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 K7EPK0 472 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 MAGEB4O15481 346 aaPredicted RBP5.05□□□□□ -1.6
PTPN4-203ENST00000430976 MBTPS2O43462 519 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 ITGA10O75578 1167 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 CDS2O95674 445 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 SERPINA7P05543 415 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 CRYBA1P05813 215 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 CSF2RBP32927 897 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 MAS1LP35410 378 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 TTPAP49638 278 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 OSTNP61366 133 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 FPGSQ05932 587 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 CD47Q08722 323 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 TRAF3Q13114 568 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 GAMTQ14353 236 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 C5orf47Q569G3 176 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 PIGGQ5H8A4 983 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 SPIN3Q5JUX0 258 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 CPTPQ5TA50 214 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 LINC00696Q6ZRV3 163 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 PAQR7Q86WK9 346 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 ADGRG3Q86Y34 549 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 MFSD6LQ8IWD5 586 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 NPAS3Q8IXF0 933 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 RNF113BQ8IZP6 322 aaKnown RBP5.05□□□□□ -1.6
PTPN4-203ENST00000430976 FAM71E2Q8N5Q1 922 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 UBA3Q8TBC4 463 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 DCAF4Q8WV16 495 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 RCN3Q96D15 328 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 C1GALT1C1Q96EU7 318 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 PRR11Q96HE9 360 aaPredicted RBP5.05□□□□□ -1.6
PTPN4-203ENST00000430976 MS4A4AQ96JQ5 239 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 CDCA3Q99618 268 aaPredicted RBP5.05□□□□□ -1.6
PTPN4-203ENST00000430976 ALG8Q9BVK2 526 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 TBL1XR1Q9BZK7 514 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 DAPP1Q9UN19 280 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 WNT6Q9Y6F9 365 aa5.05□□□□□ -1.6
PTPN4-203ENST00000430976 A0A1W2PQ27 194 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 A0A1W2PQ64 194 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 A0A1W2PQD8 194 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 ZNF785A8K8V0 405 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 RAB27BO00194 218 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 RFXANKO14593 260 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 EI24O14681 340 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 KIAA0513O60268 411 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 ADRA2CP18825 462 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 THBS2P35442 1172 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 COILP38432 576 aaPredicted RBP5.04□□□□□ -1.6
PTPN4-203ENST00000430976 RFC3P40938 356 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 PSEN2P49810 448 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 SCAPQ12770 1279 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 NFATC3Q12968 1075 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 CCNIQ14094 377 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 DPY19L1Q2PZI1 675 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 TIMM50Q3ZCQ8 353 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 ELP2Q6IA86 826 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 TSSK4Q6SA08 328 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 DPY19L4Q7Z388 723 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 ANGPTL5Q86XS5 388 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 LINC00471Q8N535 108 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 DUSP19Q8WTR2 217 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 HAVCR1Q96D42 359 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 PDXPQ96GD0 296 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 C3orf30Q96M34 536 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 ALKBH3Q96Q83 286 aaPredicted RBP5.04□□□□□ -1.6
PTPN4-203ENST00000430976 HHIPQ96QV1 700 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 ERGIC2Q96RQ1 377 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 EPYCQ99645 322 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 MICU1Q9BPX6 476 aa5.04□□□□□ -1.6
PTPN4-203ENST00000430976 ZNF649Q9BS31 505 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms