RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 MUC13Q9H3R2 512 aa10.11□□□□□ -0.79
CHD4-202ENST00000430771 RUBCNLQ9H714 662 aa10.11□□□□□ -0.79
CHD4-202ENST00000430771 UBQLN4Q9NRR5 601 aa10.11□□□□□ -0.79
CHD4-202ENST00000430771 TAS2R1Q9NYW7 299 aa10.11□□□□□ -0.79
CHD4-202ENST00000430771 PLA2G3Q9NZ20 509 aa10.11□□□□□ -0.79
CHD4-202ENST00000430771 SUCOQ9UBS9 1254 aaKnown RBP10.11□□□□□ -0.79
CHD4-202ENST00000430771 MAGEL2Q9UJ55 1249 aa10.11□□□□□ -0.79
CHD4-202ENST00000430771 CHCHD2Q9Y6H1 151 aaPredicted RBP10.11□□□□□ -0.79
CHD4-202ENST00000430771 TNRC6AQ8NDV7 1962 aaKnown RBP10.1□□□□□ -0.79
CHD4-202ENST00000430771 EPG5Q9HCE0 2579 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 NPIPA5A0A0B4J1W7 369 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 A0A1W2PQD3 144 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 PRAMEF27A3QJZ7 478 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 ALG1L2C9J202 215 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 NPIPA7E9PJI5 369 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 H3BNH8 94 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 GSTA4O15217 222 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 SCO2O43819 266 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 NME2P1O60361 137 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 SERPINB7O75635 380 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 DNAJC8O75937 253 aaPredicted RBP10.1□□□□□ -0.79
CHD4-202ENST00000430771 NEURL1O76050 574 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 STAMBPO95630 424 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 OXSR1O95747 527 aaPredicted RBP10.1□□□□□ -0.79
CHD4-202ENST00000430771 DBIP07108 87 aaKnown RBP10.1□□□□□ -0.79
CHD4-202ENST00000430771 NPIPA8P0DM63 369 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 CCL3P10147 92 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 ETS2P15036 469 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 ENDOUP21128 410 aaKnown RBP10.1□□□□□ -0.79
CHD4-202ENST00000430771 TBXA2RP21731 343 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 NME2P22392 152 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 CD96P40200 585 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 ATP12AP54707 1039 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 NCALDP61601 193 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 CHRNEQ04844 493 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 SNTA1Q13424 505 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 ZNF169Q14929 603 aaPredicted RBP10.1□□□□□ -0.79
CHD4-202ENST00000430771 ADRM1Q16186 407 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 INAQ16352 499 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 LIN52Q52LA3 116 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 ZNF766Q5HY98 468 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 SLC30A6Q6NXT4 461 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 ASB18Q6ZVZ8 466 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 YTHDF3Q7Z739 585 aaKnown RBP10.1□□□□□ -0.79
CHD4-202ENST00000430771 ZAR1Q86SH2 424 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 BHLHE22Q8NFJ8 381 aaPredicted RBP10.1□□□□□ -0.79
CHD4-202ENST00000430771 WDR60Q8WVS4 1066 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 RASSF5Q8WWW0 418 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 SLC7A6OSQ96CW6 309 aaPredicted RBP10.1□□□□□ -0.79
CHD4-202ENST00000430771 ZNF583Q96ND8 569 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 SIGLEC12Q96PQ1 595 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 NODALQ96S42 347 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 PIF1Q9H611 641 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 SH2D2AQ9NP31 389 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 CNOT11Q9UKZ1 510 aaKnown RBP10.1□□□□□ -0.79
CHD4-202ENST00000430771 MKLN1Q9UL63 735 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 IFT52Q9Y366 437 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 PCDHGB6Q9Y5F9 930 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 WIF1Q9Y5W5 379 aa10.1□□□□□ -0.79
CHD4-202ENST00000430771 PKD1L2Q7Z442 2459 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 ANKRD33BA6NCL7 494 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 PRORSD1PA6NEY8 169 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 NPIPB9F8W1W9 429 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 PGM3O95394 542 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 ZIC2O95409 532 aaPredicted RBP10.09□□□□□ -0.79
CHD4-202ENST00000430771 IFNA14P01570 189 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 PDGFAP04085 211 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 THBS1P07996 1170 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 RPS4Y1P22090 263 aaKnown RBP10.09□□□□□ -0.79
CHD4-202ENST00000430771 HTR1EP28566 365 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 AQP1P29972 269 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 MASP1P48740 699 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 PCBP3P57721 371 aaKnown RBP10.09□□□□□ -0.79
CHD4-202ENST00000430771 KCNJ2P63252 427 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 LARS2Q15031 903 aaKnown RBP10.09□□□□□ -0.79
CHD4-202ENST00000430771 MAPK11Q15759 364 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 ZNF141Q15928 474 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 ZSCAN26Q16670 478 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 ZSWIM7Q19AV6 140 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 EIPR1Q53HC9 387 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 PDZK1Q5T2W1 519 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 PRAMEF20Q5VT98 475 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 SPINK14Q6IE38 97 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 SLC25A25Q6KCM7 469 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 CMIPQ8IY22 773 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 RNF148Q8N7C7 305 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 POGLUT1Q8NBL1 392 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 SLC26A7Q8TE54 656 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 GRHL3Q8TE85 626 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 RNF138Q8WVD3 245 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 FIG4Q92562 907 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 FAM162AQ96A26 154 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 WBP1Q96G27 269 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 SCMH1Q96GD3 660 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 ZNF597Q96LX8 424 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 RNF145Q96MT1 663 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 THTPAQ9BU02 230 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 DOHHQ9BU89 302 aa10.09□□□□□ -0.79
CHD4-202ENST00000430771 MMADHCQ9H3L0 296 aaPredicted RBP10.09□□□□□ -0.79
CHD4-202ENST00000430771 ARMC7Q9H6L4 198 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms