RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 HCRTR2O43614 444 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 LYPLA1O75608 230 aaPredicted RBP16.63■□□□□ 0.25
PSPC1-202ENST00000427943 CTAG2O75638 210 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 RCBTB2O95199 551 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 TGM6O95932 706 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 IL18BPO95998 194 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 PEX19P40855 299 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 TPD52P55327 224 aaPredicted RBP16.63■□□□□ 0.25
PSPC1-202ENST00000427943 ZNF844Q08AG5 666 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 DUSP5Q16690 384 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 C6orf136Q5SQH8 315 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 LRIG3Q6UXM1 1119 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 P4HA3Q7Z4N8 544 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 ZAR1Q86SH2 424 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 HOMEZQ8IX15 550 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 MREGQ8N565 214 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 GATSQ8NAP1 163 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 FNDC5Q8NAU1 212 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 OR6Y1Q8NGX8 325 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 PPP1R14CQ8TAE6 165 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 SMPDL3BQ92485 455 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 FAM120BQ96EK7 910 aaKnown RBP16.63■□□□□ 0.25
PSPC1-202ENST00000427943 C1GALT1C1Q96EU7 318 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 ZFP3Q96NJ6 502 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 UCN2Q96RP3 112 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 TMEM109Q9BVC6 243 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 SFXN3Q9BWM7 321 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 PTGES2Q9H7Z7 377 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 ZCCHC3Q9NUD5 404 aaKnown RBP16.63■□□□□ 0.25
PSPC1-202ENST00000427943 JKAMPQ9P055 326 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 NTMQ9P121 344 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 MED13LQ71F56 2210 aa16.63■□□□□ 0.25
PSPC1-202ENST00000427943 A0A1W2PRB8 838 aa16.62■□□□□ 0.25
PSPC1-202ENST00000427943 OR2M5A3KFT3 312 aa16.62■□□□□ 0.25
PSPC1-202ENST00000427943 WDR91A4D1P6 747 aa16.62■□□□□ 0.25
PSPC1-202ENST00000427943 SHISA8B8ZZ34 492 aa16.62■□□□□ 0.25
PSPC1-202ENST00000427943 RGS16O15492 202 aaPredicted RBP16.62■□□□□ 0.25
PSPC1-202ENST00000427943 OXSR1O95747 527 aaPredicted RBP16.62■□□□□ 0.25
PSPC1-202ENST00000427943 LAMP1P11279 417 aa16.62■□□□□ 0.25
PSPC1-202ENST00000427943 PEPDP12955 493 aa16.62■□□□□ 0.25
PSPC1-202ENST00000427943 PRR5P85299 388 aa16.62■□□□□ 0.25
PSPC1-202ENST00000427943 TESK1Q15569 626 aa16.62■□□□□ 0.25
PSPC1-202ENST00000427943 CCNJQ5T5M9 372 aa16.62■□□□□ 0.25
PSPC1-202ENST00000427943 IL23RQ5VWK5 629 aa16.62■□□□□ 0.25
PSPC1-202ENST00000427943 CHMP1BQ7LBR1 199 aa16.62■□□□□ 0.25
PSPC1-202ENST00000427943 NUDCD3Q8IVD9 361 aa16.62■□□□□ 0.25
PSPC1-202ENST00000427943 MEIOBQ8N635 442 aa16.62■□□□□ 0.25
PSPC1-202ENST00000427943 KRTCAP2Q8N6L1 136 aa16.62■□□□□ 0.25
PSPC1-202ENST00000427943 COX18Q8N8Q8 333 aa16.62■□□□□ 0.25
PSPC1-202ENST00000427943 OR4C3Q8NH37 302 aa16.62■□□□□ 0.25
PSPC1-202ENST00000427943 TUBGCP3Q96CW5 907 aa16.62■□□□□ 0.25
PSPC1-202ENST00000427943 RBM24Q9BX46 236 aaKnown RBP16.62■□□□□ 0.25
PSPC1-202ENST00000427943 PARD6BQ9BYG5 372 aa16.62■□□□□ 0.25
PSPC1-202ENST00000427943 FBXO34Q9NWN3 711 aa16.62■□□□□ 0.25
PSPC1-202ENST00000427943 ZNF337Q9Y3M9 751 aa16.62■□□□□ 0.25
PSPC1-202ENST00000427943 SNX8Q9Y5X2 465 aa16.62■□□□□ 0.25
PSPC1-202ENST00000427943 HIVEP1P15822 2718 aa16.62■□□□□ 0.25
PSPC1-202ENST00000427943 A6NNC1 897 aa16.61■□□□□ 0.25
PSPC1-202ENST00000427943 ITM2AO43736 263 aa16.61■□□□□ 0.25
PSPC1-202ENST00000427943 KCNK2O95069 426 aa16.61■□□□□ 0.25
PSPC1-202ENST00000427943 HSPA4LO95757 839 aa16.61■□□□□ 0.25
PSPC1-202ENST00000427943 ALOX5P09917 674 aa16.61■□□□□ 0.25
PSPC1-202ENST00000427943 DNAJA1P31689 397 aaKnown RBP16.61■□□□□ 0.25
PSPC1-202ENST00000427943 RPL3P39023 403 aaKnown RBP16.61■□□□□ 0.25
PSPC1-202ENST00000427943 CPA2P48052 419 aa16.61■□□□□ 0.25
PSPC1-202ENST00000427943 SERPINB4P48594 390 aa16.61■□□□□ 0.25
PSPC1-202ENST00000427943 SUCLG1P53597 346 aaKnown RBP16.61■□□□□ 0.25
PSPC1-202ENST00000427943 CLDN15P56746 228 aa16.61■□□□□ 0.25
PSPC1-202ENST00000427943 C17orf67Q0P5P2 114 aa16.61■□□□□ 0.25
PSPC1-202ENST00000427943 LASP1Q14847 261 aaKnown RBP16.61■□□□□ 0.25
PSPC1-202ENST00000427943 BCL2A1Q16548 175 aa16.61■□□□□ 0.25
PSPC1-202ENST00000427943 KIF18BQ86Y91 864 aa16.61■□□□□ 0.25
PSPC1-202ENST00000427943 LINC01560Q8TB33 94 aa16.61■□□□□ 0.25
PSPC1-202ENST00000427943 FAM222BQ8WU58 562 aa16.61■□□□□ 0.25
PSPC1-202ENST00000427943 CHMP6Q96FZ7 201 aa16.61■□□□□ 0.25
PSPC1-202ENST00000427943 PPP1R36Q96LQ0 422 aa16.61■□□□□ 0.25
PSPC1-202ENST00000427943 CLEC4MQ9H2X3 399 aaPredicted RBP16.61■□□□□ 0.25
PSPC1-202ENST00000427943 ACBD3Q9H3P7 528 aa16.61■□□□□ 0.25
PSPC1-202ENST00000427943 ZNF395Q9H8N7 513 aaPredicted RBP16.61■□□□□ 0.25
PSPC1-202ENST00000427943 RASSF1Q9NS23 344 aa16.61■□□□□ 0.25
PSPC1-202ENST00000427943 GALNT8Q9NY28 637 aa16.61■□□□□ 0.25
PSPC1-202ENST00000427943 VDAC3Q9Y277 283 aa16.61■□□□□ 0.25
PSPC1-202ENST00000427943 A0A1W2PNV4 684 aa16.6■□□□□ 0.25
PSPC1-202ENST00000427943 TUBAL3A6NHL2 446 aa16.6■□□□□ 0.25
PSPC1-202ENST00000427943 SLC22A20A6NK97 555 aa16.6■□□□□ 0.25
PSPC1-202ENST00000427943 CTIFO43310 598 aaKnown RBP16.6■□□□□ 0.25
PSPC1-202ENST00000427943 NDUFB5O43674 189 aa16.6■□□□□ 0.25
PSPC1-202ENST00000427943 ZNF500O60304 480 aaPredicted RBP16.6■□□□□ 0.25
PSPC1-202ENST00000427943 C6orf47O95873 294 aa16.6■□□□□ 0.25
PSPC1-202ENST00000427943 HMGN2P05204 90 aaKnown RBP16.6■□□□□ 0.25
PSPC1-202ENST00000427943 DDX5P17844 614 aaKnown RBP16.6■□□□□ 0.25
PSPC1-202ENST00000427943 PRIM2P49643 509 aa16.6■□□□□ 0.25
PSPC1-202ENST00000427943 CLDN20P56880 219 aa16.6■□□□□ 0.25
PSPC1-202ENST00000427943 SORDQ00796 357 aa16.6■□□□□ 0.25
PSPC1-202ENST00000427943 MLC1Q15049 377 aa16.6■□□□□ 0.25
PSPC1-202ENST00000427943 CHI3L2Q15782 390 aa16.6■□□□□ 0.25
PSPC1-202ENST00000427943 PDCD2Q16342 344 aaPredicted RBP16.6■□□□□ 0.25
PSPC1-202ENST00000427943 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.6■□□□□ 0.25
PSPC1-202ENST00000427943 FAM110BQ8TC76 370 aa16.6■□□□□ 0.25
PSPC1-202ENST00000427943 FIG4Q92562 907 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms