RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 CCDC74BQ96LY2 380 aa24.65■■□□□ 1.54
SH3GL3-202ENST00000427482 POLR2J3Q9H1A7 115 aaKnown RBP24.65■■□□□ 1.54
SH3GL3-202ENST00000427482 SCN3BQ9NY72 215 aa24.65■■□□□ 1.54
SH3GL3-202ENST00000427482 PTGES3LE9PB15 166 aa24.64■■□□□ 1.54
SH3GL3-202ENST00000427482 H3BSA7 217 aa24.64■■□□□ 1.54
SH3GL3-202ENST00000427482 RFX3P48380 749 aa24.64■■□□□ 1.54
SH3GL3-202ENST00000427482 EFNA3P52797 238 aa24.64■■□□□ 1.54
SH3GL3-202ENST00000427482 PMS2P3Q13401 168 aa24.64■■□□□ 1.54
SH3GL3-202ENST00000427482 NEDD8Q15843 81 aa24.64■■□□□ 1.54
SH3GL3-202ENST00000427482 RANBP3LQ86VV4 465 aaPredicted RBP24.64■■□□□ 1.54
SH3GL3-202ENST00000427482 C7orf57Q8NEG2 295 aa24.64■■□□□ 1.54
SH3GL3-202ENST00000427482 ITPAQ9BY32 194 aa24.64■■□□□ 1.54
SH3GL3-202ENST00000427482 POLR2J2Q9GZM3 115 aaKnown RBP24.64■■□□□ 1.54
SH3GL3-202ENST00000427482 DUSP21Q9H596 190 aa24.64■■□□□ 1.54
SH3GL3-202ENST00000427482 VCX3AQ9NNX9 186 aa24.64■■□□□ 1.54
SH3GL3-202ENST00000427482 MKKSQ9NPJ1 570 aaPredicted RBP24.64■■□□□ 1.54
SH3GL3-202ENST00000427482 ZNF226Q9NYT6 803 aa24.64■■□□□ 1.54
SH3GL3-202ENST00000427482 SP9P0CG40 484 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 SLC35A2P78381 396 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 LSM11P83369 360 aaKnown RBP eCLIP24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 TEKQ02763 1124 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 PIGFQ07326 219 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 COX10Q12887 443 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 VWA2Q5GFL6 755 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 GDF7Q7Z4P5 450 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 TMEM151BQ8IW70 566 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 SLC41A3Q96GZ6 507 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 SENP5Q96HI0 755 aaPredicted RBP24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 NODALQ96S42 347 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 ARMC7Q9H6L4 198 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 TCRBV16S1A1N1A0A5B0 115 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 CCDC160A6NGH7 325 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 FAM20BO75063 409 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 THY1P04216 161 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 TP53P04637 393 aaPredicted RBP24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 GABRB1P18505 474 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 CDC42P60953 191 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 CSNK2BP67870 215 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 DAB2P98082 770 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 TMEM236Q5W0B7 351 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 XAF1Q6GPH4 301 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 OR6C1Q96RD1 312 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 EVA1AQ9H8M9 152 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 PCDHGA10Q9Y5H3 936 aa24.63■■□□□ 1.53
SH3GL3-202ENST00000427482 PRG2P13727 222 aa24.62■■□□□ 1.53
SH3GL3-202ENST00000427482 POU1F1P28069 291 aa24.62■■□□□ 1.53
SH3GL3-202ENST00000427482 ALDH6A1Q02252 535 aaKnown RBP24.62■■□□□ 1.53
SH3GL3-202ENST00000427482 PLAURQ03405 335 aa24.62■■□□□ 1.53
SH3GL3-202ENST00000427482 RAB39AQ14964 217 aa24.62■■□□□ 1.53
SH3GL3-202ENST00000427482 LPAL2Q16609 132 aa24.62■■□□□ 1.53
SH3GL3-202ENST00000427482 DECR1Q16698 335 aa24.62■■□□□ 1.53
SH3GL3-202ENST00000427482 PDZK1Q5T2W1 519 aa24.62■■□□□ 1.53
SH3GL3-202ENST00000427482 CCDC103Q8IW40 242 aa24.62■■□□□ 1.53
SH3GL3-202ENST00000427482 TOR1AIP2Q8NFQ8 470 aa24.62■■□□□ 1.53
SH3GL3-202ENST00000427482 G6PC3Q9BUM1 346 aa24.62■■□□□ 1.53
SH3GL3-202ENST00000427482 GTPBP2Q9BX10 602 aaKnown RBP24.62■■□□□ 1.53
SH3GL3-202ENST00000427482 IMPAD1Q9NX62 359 aa24.62■■□□□ 1.53
SH3GL3-202ENST00000427482 CBLCQ9ULV8 474 aa24.62■■□□□ 1.53
SH3GL3-202ENST00000427482 SNX5Q9Y5X3 404 aa24.62■■□□□ 1.53
SH3GL3-202ENST00000427482 NCOR1O75376 2440 aa24.62■■□□□ 1.53
SH3GL3-202ENST00000427482 ASCC3Q8N3C0 2202 aaKnown RBP24.62■■□□□ 1.53
SH3GL3-202ENST00000427482 SOX14O95416 240 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 IFNGR2P38484 337 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 RNF144AP50876 292 aaPredicted RBP24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 SLC37A1P57057 533 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 ELAVL1Q15717 326 aaKnown RBP24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 NNATQ16517 81 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 ZNF730Q6ZMV8 503 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 COX15Q7KZN9 410 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 P3H2Q8IVL5 708 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 NKAIN4Q8IVV8 208 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 ACOT11Q8WXI4 607 aaPredicted RBP24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 TUBA1CQ9BQE3 449 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 A8MUA0 341 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 NPIPB9F8W1W9 429 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 DYRK3O43781 588 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 FMO6PO60774 539 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 BCAS1O75363 584 aaPredicted RBP24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 IGFBP1P08833 259 aaPredicted RBP24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 GKN3PP0CG01 181 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 DRD5P21918 477 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 HTR2AP28223 471 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 TTKP33981 857 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 DUSP3P51452 185 aaPredicted RBP24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 CLPPQ16740 277 aaPredicted RBP24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 SLX4IPQ5VYV7 408 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 BCORP1Q8N888 145 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 ZNF321PQ8N8H1 164 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 ZSCAN1Q8NBB4 408 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 GPA33Q99795 319 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 SLC7A5P2Q9GIP4 190 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 PLCXD1Q9NUJ7 323 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 SIDT1Q9NXL6 827 aaKnown RBP24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 ERVK-18Q9QC07 812 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 TESQ9UGI8 421 aaKnown RBP24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 OR10H1Q9Y4A9 318 aa24.61■■□□□ 1.53
SH3GL3-202ENST00000427482 GSTM3P21266 225 aa24.6■■□□□ 1.53
SH3GL3-202ENST00000427482 ZNF141Q15928 474 aa24.6■■□□□ 1.53
SH3GL3-202ENST00000427482 ZNF540Q8NDQ6 660 aa24.6■■□□□ 1.53
SH3GL3-202ENST00000427482 GNPDA2Q8TDQ7 276 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms