RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 CAMSAP2Q08AD1 1489 aa1.87□□□□□ -2.11
PTPRC-208ENST00000427110 TEX14Q8IWB6 1497 aa1.87□□□□□ -2.11
PTPRC-208ENST00000427110 GRIN2DO15399 1336 aa1.87□□□□□ -2.11
PTPRC-208ENST00000427110 GPATCH8Q9UKJ3 1502 aaKnown RBP1.86□□□□□ -2.11
PTPRC-208ENST00000427110 TONSLQ96HA7 1378 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 ANKRD30BQ9BXX2 1392 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 GON4LQ3T8J9 2241 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 UNC13BO14795 1591 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 PLXNC1O60486 1568 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 PTPRGP23470 1445 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 NCOA1Q15788 1441 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 IGKV6D-41A0A0C4DH26 115 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 RGSL1A5PLK6 1076 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 LRRC30A6NM36 301 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 A8MX80 341 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 C19orf81C9J6K1 198 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 PPIHO43447 177 aaKnown RBP1.86□□□□□ -2.11
PTPRC-208ENST00000427110 SRSF10O75494 262 aaKnown RBP1.86□□□□□ -2.11
PTPRC-208ENST00000427110 NOL4O94818 638 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 TOXO94900 526 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 GJB5O95377 273 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 IFNB1P01574 187 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 H2AFZP0C0S5 128 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 CT45A10P0DMU9 189 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 CALCBP10092 127 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 THRBP10828 461 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 ANXA3P12429 323 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 UQCRBP14927 111 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 AZU1P20160 251 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 IGFBP5P24593 272 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 CYP2F1P24903 491 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 GDF1P27539 372 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 KIF5BP33176 963 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 CYLC1P35663 651 aaPredicted RBP1.86□□□□□ -2.11
PTPRC-208ENST00000427110 DLSTP36957 453 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 PTGFRP43088 359 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 XCR1P46094 333 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 ALDH3B2P48448 385 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 EMDP50402 254 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 RPS6P62753 249 aaKnown RBP1.86□□□□□ -2.11
PTPRC-208ENST00000427110 CD47Q08722 323 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 DPYSQ14117 519 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 TRIP10Q15642 601 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 QRICH1Q2TAL8 776 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 ADPRMQ3LIE5 342 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 TTC31Q49AM3 519 aaPredicted RBP1.86□□□□□ -2.11
PTPRC-208ENST00000427110 CYBRD1Q53TN4 286 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 LEG1Q6P5S2 330 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 AFTPHQ6ULP2 937 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 CCBE1Q6UXH8 406 aaPredicted RBP1.86□□□□□ -2.11
PTPRC-208ENST00000427110 HACD2Q6Y1H2 254 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 CATSPER4Q7RTX7 472 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 SH2D6Q7Z4S9 175 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 CADM2Q8N3J6 435 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 Q8N9G6 341 aaPredicted RBP1.86□□□□□ -2.11
PTPRC-208ENST00000427110 STKLD1Q8NE28 680 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 KLHL30-AS1Q8NEE0 82 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 ZPLD1Q8TCW7 415 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 TFB1MQ8WVM0 346 aaKnown RBP1.86□□□□□ -2.11
PTPRC-208ENST00000427110 GTSF1Q8WW33 167 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 TAF4BQ92750 862 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 UPRTQ96BW1 309 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 MRPL38Q96DV4 380 aaKnown RBP1.86□□□□□ -2.11
PTPRC-208ENST00000427110 VSTM2LQ96N03 204 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 CASD1Q96PB1 797 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 FICDQ9BVA6 458 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 HCAR1Q9BXC0 346 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 GLT8D2Q9H1C3 349 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 LPAR2Q9HBW0 351 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 MIEF1Q9NQG6 463 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 EXOSC3Q9NQT5 275 aaKnown RBP1.86□□□□□ -2.11
PTPRC-208ENST00000427110 RBM28Q9NW13 759 aaKnown RBP1.86□□□□□ -2.11
PTPRC-208ENST00000427110 TAS2R3Q9NYW6 316 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 KIF3AQ9Y496 699 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 AP4B1Q9Y6B7 739 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 LAMC1P11047 1609 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 ATP10BO94823 1461 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 PZPP20742 1482 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 PLB1Q6P1J6 1458 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 MBD5Q9P267 1494 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 PRRC2AP48634 2157 aaKnown RBP1.86□□□□□ -2.11
PTPRC-208ENST00000427110 HCFC1P51610 2035 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 E9PCH4 1651 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 CLASP1Q7Z460 1538 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 ARAP3Q8WWN8 1544 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 ARHGEF12Q9NZN5 1544 aa1.86□□□□□ -2.11
PTPRC-208ENST00000427110 KDM5CP41229 1560 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 SAMD9LQ8IVG5 1584 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 NCAPD2Q15021 1401 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 UHRF1BP1Q6BDS2 1440 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 SPATA31E1Q6ZUB1 1445 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 POGZQ7Z3K3 1410 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 PRG4Q92954 1404 aaPredicted RBP1.85□□□□□ -2.11
PTPRC-208ENST00000427110 KIAA1107Q9UPP5 1409 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 IQGAP3Q86VI3 1631 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 IGLV3-10A0A075B6K4 115 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 A0A0U1RQV5 110 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 RNF222A6NCQ9 220 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 F8WDY8 70 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 PHOX2AO14813 284 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms