RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 SCN2BO60939 215 aa16.6■□□□□ 0.25
SMARCAL1-205ENST00000425815 ANGPTL1O95841 491 aa16.6■□□□□ 0.25
SMARCAL1-205ENST00000425815 ALOX5P09917 674 aa16.6■□□□□ 0.25
SMARCAL1-205ENST00000425815 ZNF708P17019 499 aa16.6■□□□□ 0.25
SMARCAL1-205ENST00000425815 DDX5P17844 614 aaKnown RBP16.6■□□□□ 0.25
SMARCAL1-205ENST00000425815 CHMP24386 653 aa16.6■□□□□ 0.25
SMARCAL1-205ENST00000425815 CCT3P49368 545 aaKnown RBP16.6■□□□□ 0.25
SMARCAL1-205ENST00000425815 PHC1P78364 1004 aa16.6■□□□□ 0.25
SMARCAL1-205ENST00000425815 MAD2L1Q13257 205 aaPredicted RBP16.6■□□□□ 0.25
SMARCAL1-205ENST00000425815 LASP1Q14847 261 aaKnown RBP16.6■□□□□ 0.25
SMARCAL1-205ENST00000425815 CCNJQ5T5M9 372 aa16.6■□□□□ 0.25
SMARCAL1-205ENST00000425815 SZRD1Q7Z422 152 aa16.6■□□□□ 0.25
SMARCAL1-205ENST00000425815 LURAP1LQ8IV03 231 aa16.6■□□□□ 0.25
SMARCAL1-205ENST00000425815 NATD1Q8N6N6 113 aa16.6■□□□□ 0.25
SMARCAL1-205ENST00000425815 SFXN2Q96NB2 322 aa16.6■□□□□ 0.25
SMARCAL1-205ENST00000425815 PRPF18Q99633 342 aaKnown RBP16.6■□□□□ 0.25
SMARCAL1-205ENST00000425815 DUSP26Q9BV47 211 aa16.6■□□□□ 0.25
SMARCAL1-205ENST00000425815 NUF2Q9BZD4 464 aa16.6■□□□□ 0.25
SMARCAL1-205ENST00000425815 SDHAF3Q9NRP4 125 aa16.6■□□□□ 0.25
SMARCAL1-205ENST00000425815 ATAD3AQ9NVI7 634 aa16.6■□□□□ 0.25
SMARCAL1-205ENST00000425815 GIN1Q9NXP7 522 aa16.6■□□□□ 0.25
SMARCAL1-205ENST00000425815 SNX8Q9Y5X2 465 aa16.6■□□□□ 0.25
SMARCAL1-205ENST00000425815 ABCA12Q86UK0 2595 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 ALG1L2C9J202 215 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 SYT5O00445 386 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 ANKRD28O15084 1053 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 SNNO75324 88 aaPredicted RBP16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 OXSR1O95747 527 aaPredicted RBP16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 IL2RAP01589 272 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 NGFRP08138 427 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 FREM3P0C091 2139 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 HK1P19367 917 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 TBXA2RP21731 343 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 PRIM2P49643 509 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 AGFG1P52594 562 aaKnown RBP16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 SLC18A1P54219 525 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 MAGOHP61326 146 aaKnown RBP16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 HBA1P69905 142 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 SF3B4Q15427 424 aaKnown RBP eCLIP16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 BCL2A1Q16548 175 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 LSM12Q3MHD2 195 aaKnown RBP16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 HHATQ5VTY9 493 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 AAGABQ6PD74 315 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 ENPP6Q6UWR7 440 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 OR5M1Q8NGP8 315 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 C1GALT1C1Q96EU7 318 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 LURAP1Q96LR2 239 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 STACQ99469 402 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 KLHDC3Q9BQ90 382 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 PIGUQ9H490 435 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 MEAF6Q9HAF1 191 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 ZNF629Q9UEG4 869 aaPredicted RBP16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 ZNF337Q9Y3M9 751 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 PKDREJQ9NTG1 2253 aa16.59■□□□□ 0.25
SMARCAL1-205ENST00000425815 CACNA1CQ13936 2221 aa16.58■□□□□ 0.25
SMARCAL1-205ENST00000425815 CLCA1A8K7I4 914 aa16.58■□□□□ 0.24
SMARCAL1-205ENST00000425815 BMP5P22003 454 aa16.58■□□□□ 0.24
SMARCAL1-205ENST00000425815 SSTR2P30874 369 aa16.58■□□□□ 0.24
SMARCAL1-205ENST00000425815 GCKP35557 465 aa16.58■□□□□ 0.24
SMARCAL1-205ENST00000425815 CLK3P49761 638 aaKnown RBP16.58■□□□□ 0.24
SMARCAL1-205ENST00000425815 C17orf67Q0P5P2 114 aa16.58■□□□□ 0.24
SMARCAL1-205ENST00000425815 FOXF2Q12947 444 aa16.58■□□□□ 0.24
SMARCAL1-205ENST00000425815 SNTB1Q13884 538 aaKnown RBP16.58■□□□□ 0.24
SMARCAL1-205ENST00000425815 TMEM44Q2T9K0 475 aa16.58■□□□□ 0.24
SMARCAL1-205ENST00000425815 PGS1Q32NB8 556 aa16.58■□□□□ 0.24
SMARCAL1-205ENST00000425815 OR4F3Q6IEY1 312 aa16.58■□□□□ 0.24
SMARCAL1-205ENST00000425815 CDC73Q6P1J9 531 aa16.58■□□□□ 0.24
SMARCAL1-205ENST00000425815 ARSKQ6UWY0 536 aa16.58■□□□□ 0.24
SMARCAL1-205ENST00000425815 CLECL1Q8IZS7 167 aa16.58■□□□□ 0.24
SMARCAL1-205ENST00000425815 MGARPQ8TDB4 240 aa16.58■□□□□ 0.24
SMARCAL1-205ENST00000425815 CDS1Q92903 461 aa16.58■□□□□ 0.24
SMARCAL1-205ENST00000425815 SH3GL2Q99962 352 aa16.58■□□□□ 0.24
SMARCAL1-205ENST00000425815 BTBD2Q9BX70 525 aa16.58■□□□□ 0.24
SMARCAL1-205ENST00000425815 TBL1XR1Q9BZK7 514 aa16.58■□□□□ 0.24
SMARCAL1-205ENST00000425815 DUSP22Q9NRW4 184 aa16.58■□□□□ 0.24
SMARCAL1-205ENST00000425815 CLCF1Q9UBD9 225 aa16.58■□□□□ 0.24
SMARCAL1-205ENST00000425815 MED12Q93074 2177 aa16.58■□□□□ 0.24
SMARCAL1-205ENST00000425815 KIAA1549Q9HCM3 1950 aa16.57■□□□□ 0.24
SMARCAL1-205ENST00000425815 H0Y3Z8 333 aa16.57■□□□□ 0.24
SMARCAL1-205ENST00000425815 H0YC42 278 aa16.57■□□□□ 0.24
SMARCAL1-205ENST00000425815 SDHDO14521 159 aa16.57■□□□□ 0.24
SMARCAL1-205ENST00000425815 ERLIN1O75477 346 aa16.57■□□□□ 0.24
SMARCAL1-205ENST00000425815 RCBTB2O95199 551 aa16.57■□□□□ 0.24
SMARCAL1-205ENST00000425815 CTSSP25774 331 aa16.57■□□□□ 0.24
SMARCAL1-205ENST00000425815 LCN1P31025 176 aa16.57■□□□□ 0.24
SMARCAL1-205ENST00000425815 SUCLG1P53597 346 aaKnown RBP16.57■□□□□ 0.24
SMARCAL1-205ENST00000425815 TPD52P55327 224 aaPredicted RBP16.57■□□□□ 0.24
SMARCAL1-205ENST00000425815 POU6F2P78424 691 aaPredicted RBP16.57■□□□□ 0.24
SMARCAL1-205ENST00000425815 TLE4Q04727 773 aa16.57■□□□□ 0.24
SMARCAL1-205ENST00000425815 RCAN2Q14206 197 aa16.57■□□□□ 0.24
SMARCAL1-205ENST00000425815 CLEC4FQ8N1N0 589 aa16.57■□□□□ 0.24
SMARCAL1-205ENST00000425815 COX18Q8N8Q8 333 aa16.57■□□□□ 0.24
SMARCAL1-205ENST00000425815 OR8J2Q8NGG1 315 aa16.57■□□□□ 0.24
SMARCAL1-205ENST00000425815 OR56A1Q8NGH5 318 aa16.57■□□□□ 0.24
SMARCAL1-205ENST00000425815 OR5AK3PQ8NH89 298 aa16.57■□□□□ 0.24
SMARCAL1-205ENST00000425815 JADE3Q92613 823 aa16.57■□□□□ 0.24
SMARCAL1-205ENST00000425815 NPAS1Q99742 590 aa16.57■□□□□ 0.24
SMARCAL1-205ENST00000425815 ACTRT3Q9BYD9 372 aa16.57■□□□□ 0.24
SMARCAL1-205ENST00000425815 SERHL2Q9H4I8 314 aa16.57■□□□□ 0.24
SMARCAL1-205ENST00000425815 THAP1Q9NVV9 213 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms