RNA–Protein interactions for RNA: ENST00000425428.6

CD44-207, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,768 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-207ENST00000425428 OR4N2Q8NGD1 307 aa9.3□□□□□ -0.92
CD44-207ENST00000425428 FAM110BQ8TC76 370 aa9.3□□□□□ -0.92
CD44-207ENST00000425428 STMN2Q93045 179 aa9.3□□□□□ -0.92
CD44-207ENST00000425428 RSRC1Q96IZ7 334 aaKnown RBP9.3□□□□□ -0.92
CD44-207ENST00000425428 TPD52L3Q96J77 140 aa9.3□□□□□ -0.92
CD44-207ENST00000425428 RNF32Q9H0A6 362 aa9.3□□□□□ -0.92
CD44-207ENST00000425428 YY1AP1Q9H869 796 aa9.3□□□□□ -0.92
CD44-207ENST00000425428 GORASP2Q9H8Y8 452 aa9.3□□□□□ -0.92
CD44-207ENST00000425428 SACM1LQ9NTJ5 587 aa9.3□□□□□ -0.92
CD44-207ENST00000425428 PACSIN3Q9UKS6 424 aa9.3□□□□□ -0.92
CD44-207ENST00000425428 SLC35A3Q9Y2D2 325 aa9.3□□□□□ -0.92
CD44-207ENST00000425428 SLC9A8Q9Y2E8 581 aa9.3□□□□□ -0.92
CD44-207ENST00000425428 SSUH2Q9Y2M2 353 aa9.3□□□□□ -0.92
CD44-207ENST00000425428 KCNE3Q9Y6H6 103 aa9.3□□□□□ -0.92
CD44-207ENST00000425428 CNTRLQ7Z7A1 2325 aa9.3□□□□□ -0.92
CD44-207ENST00000425428 CEP295Q9C0D2 2601 aa9.3□□□□□ -0.92
CD44-207ENST00000425428 EXPH5Q8NEV8 1989 aa9.3□□□□□ -0.92
CD44-207ENST00000425428 CPAMD8Q8IZJ3 1885 aa9.3□□□□□ -0.92
CD44-207ENST00000425428 OR5H15A6NDH6 313 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 M0QX08 132 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 ARPC2O15144 300 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 NDUFB5O43674 189 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 KIAA0513O60268 411 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 TSPAN2O60636 221 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 THBS1P07996 1170 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 TBXA2RP21731 343 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 PSMA4P25789 261 aaKnown RBP9.29□□□□□ -0.92
CD44-207ENST00000425428 ITPKBP27987 946 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 MASP1P48740 699 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 SNTA1Q13424 505 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 FAM98BQ52LJ0 330 aaKnown RBP9.29□□□□□ -0.92
CD44-207ENST00000425428 EXOSC6Q5RKV6 272 aaKnown RBP9.29□□□□□ -0.92
CD44-207ENST00000425428 B3GNTL1Q67FW5 361 aaPredicted RBP9.29□□□□□ -0.92
CD44-207ENST00000425428 TYW3Q6IPR3 259 aaKnown RBP9.29□□□□□ -0.92
CD44-207ENST00000425428 SLC30A6Q6NXT4 461 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 GALNT10Q86SR1 603 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 PACS2Q86VP3 889 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 SPATA24Q86W54 205 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 PTRH1Q86Y79 214 aaKnown RBP9.29□□□□□ -0.92
CD44-207ENST00000425428 ZNF440Q8IYI8 595 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 TMEM178AQ8NBL3 297 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 FAM156AQ8NDB6 213 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 FDCSPQ8NFU4 85 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 CLPTM1LQ96KA5 538 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 PINK1Q9BXM7 581 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 SAP130Q9H0E3 1048 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 DTNAQ9Y4J8 743 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 PCDHGA9Q9Y5G4 932 aaKnown RBP9.29□□□□□ -0.92
CD44-207ENST00000425428 PRAMEF25A6NGN4 478 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 KLRC4-KLRK1H3BQV0 150 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 MASP2O00187 686 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 OR6B1O95007 311 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 SNX4O95219 450 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 SERPINA1P01009 418 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 CSTAP01040 98 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 NGFRP08138 427 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 CHRM4P08173 479 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 PABPC4LP0CB38 370 aaKnown RBP9.29□□□□□ -0.92
CD44-207ENST00000425428 UMPSP11172 480 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 SFTPCP11686 197 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 CYP4B1P13584 511 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 NCK1P16333 377 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 PRKAR1BP31321 381 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 EVI2BP34910 448 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 GZMMP51124 257 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 FBXW4P57775 412 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 KCNJ2P63252 427 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 C17orf67Q0P5P2 114 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 ADRM1Q16186 407 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 RPS26P11Q5JNZ5 115 aaPredicted RBP9.29□□□□□ -0.92
CD44-207ENST00000425428 FRRS1Q6ZNA5 592 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 TMCO5AQ8N6Q1 288 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 PHOSPHO1Q8TCT1 267 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 PCDHAC1Q9H158 963 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 SLC38A1Q9H2H9 487 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 PTGES2Q9H7Z7 377 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 SELENONQ9NZV5 590 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 PPP4R1LQ9P1A2 415 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 POMPQ9Y244 141 aa9.29□□□□□ -0.92
CD44-207ENST00000425428 KLF13Q9Y2Y9 288 aaPredicted RBP9.29□□□□□ -0.92
CD44-207ENST00000425428 FAM32AQ9Y421 112 aaKnown RBP9.29□□□□□ -0.92
CD44-207ENST00000425428 GPC6Q9Y625 555 aaPredicted RBP9.29□□□□□ -0.92
CD44-207ENST00000425428 AKAP13Q12802 2813 aa9.28□□□□□ -0.92
CD44-207ENST00000425428 A0A1W2PQD3 144 aa9.28□□□□□ -0.92
CD44-207ENST00000425428 AGAP5A6NIR3 686 aa9.28□□□□□ -0.92
CD44-207ENST00000425428 TMEM200CA6NKL6 621 aa9.28□□□□□ -0.92
CD44-207ENST00000425428 AQP12BA6NM10 295 aa9.28□□□□□ -0.92
CD44-207ENST00000425428 FCMRO60667 390 aa9.28□□□□□ -0.92
CD44-207ENST00000425428 DPM1O60762 260 aa9.28□□□□□ -0.92
CD44-207ENST00000425428 ICOSLGO75144 302 aa9.28□□□□□ -0.92
CD44-207ENST00000425428 UGT2B11O75310 529 aa9.28□□□□□ -0.92
CD44-207ENST00000425428 CYP7B1O75881 506 aa9.28□□□□□ -0.92
CD44-207ENST00000425428 NUDT14O95848 222 aa9.28□□□□□ -0.92
CD44-207ENST00000425428 WDPCPO95876 746 aa9.28□□□□□ -0.92
CD44-207ENST00000425428 C8BP07358 591 aa9.28□□□□□ -0.92
CD44-207ENST00000425428 UBL4AP11441 157 aa9.28□□□□□ -0.92
CD44-207ENST00000425428 NID1P14543 1247 aa9.28□□□□□ -0.92
CD44-207ENST00000425428 ITGA2P17301 1181 aa9.28□□□□□ -0.92
CD44-207ENST00000425428 MSX2P35548 267 aaPredicted RBP9.28□□□□□ -0.92
CD44-207ENST00000425428 COPZ1P61923 177 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms