RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 SIRT3Q9NTG7 399 aaPredicted RBP16.68■□□□□ 0.26
NUP50-207ENST00000424634 FBXO34Q9NWN3 711 aa16.68■□□□□ 0.26
NUP50-207ENST00000424634 IGLV3-32A0A0A0MS00 114 aa16.67■□□□□ 0.26
NUP50-207ENST00000424634 OR2M5A3KFT3 312 aa16.67■□□□□ 0.26
NUP50-207ENST00000424634 A6NNC1 897 aa16.67■□□□□ 0.26
NUP50-207ENST00000424634 EMC8O43402 210 aa16.67■□□□□ 0.26
NUP50-207ENST00000424634 ANGPTL1O95841 491 aa16.67■□□□□ 0.26
NUP50-207ENST00000424634 LAMP1P11279 417 aa16.67■□□□□ 0.26
NUP50-207ENST00000424634 PEPDP12955 493 aa16.67■□□□□ 0.26
NUP50-207ENST00000424634 PSMD4P55036 377 aaKnown RBP16.67■□□□□ 0.26
NUP50-207ENST00000424634 PTGR1Q14914 329 aa16.67■□□□□ 0.26
NUP50-207ENST00000424634 DAZAP2Q15038 168 aaPredicted RBP16.67■□□□□ 0.26
NUP50-207ENST00000424634 DUSP5Q16690 384 aa16.67■□□□□ 0.26
NUP50-207ENST00000424634 RAET1LQ5VY80 246 aa16.67■□□□□ 0.26
NUP50-207ENST00000424634 MFSD12Q6NUT3 480 aa16.67■□□□□ 0.26
NUP50-207ENST00000424634 SPNS3Q6ZMD2 512 aa16.67■□□□□ 0.26
NUP50-207ENST00000424634 HOMEZQ8IX15 550 aa16.67■□□□□ 0.26
NUP50-207ENST00000424634 UBQLNLQ8IYU4 475 aa16.67■□□□□ 0.26
NUP50-207ENST00000424634 OTUB1Q96FW1 271 aaPredicted RBP16.67■□□□□ 0.26
NUP50-207ENST00000424634 YIPF4Q9BSR8 244 aa16.67■□□□□ 0.26
NUP50-207ENST00000424634 C1orf50Q9BV19 199 aa16.67■□□□□ 0.26
NUP50-207ENST00000424634 SFXN3Q9BWM7 321 aa16.67■□□□□ 0.26
NUP50-207ENST00000424634 POLDIP3Q9BY77 421 aaKnown RBP16.67■□□□□ 0.26
NUP50-207ENST00000424634 TBL1XR1Q9BZK7 514 aa16.67■□□□□ 0.26
NUP50-207ENST00000424634 ZNF395Q9H8N7 513 aaPredicted RBP16.67■□□□□ 0.26
NUP50-207ENST00000424634 PRRC2AP48634 2157 aaKnown RBP16.67■□□□□ 0.26
NUP50-207ENST00000424634 ZNF469Q96JG9 3925 aaPredicted RBP16.66■□□□□ 0.26
NUP50-207ENST00000424634 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.66■□□□□ 0.26
NUP50-207ENST00000424634 TUBAL3A6NHL2 446 aa16.66■□□□□ 0.26
NUP50-207ENST00000424634 SHISA8B8ZZ34 492 aa16.66■□□□□ 0.26
NUP50-207ENST00000424634 SCAMP2O15127 329 aaKnown RBP16.66■□□□□ 0.26
NUP50-207ENST00000424634 GMFGO60234 142 aa16.66■□□□□ 0.26
NUP50-207ENST00000424634 TNFSF13O75888 250 aa16.66■□□□□ 0.26
NUP50-207ENST00000424634 KCNK2O95069 426 aa16.66■□□□□ 0.26
NUP50-207ENST00000424634 SERPINB5P36952 375 aa16.66■□□□□ 0.26
NUP50-207ENST00000424634 CLK3P49761 638 aaKnown RBP16.66■□□□□ 0.26
NUP50-207ENST00000424634 CLDN20P56880 219 aa16.66■□□□□ 0.26
NUP50-207ENST00000424634 C17orf67Q0P5P2 114 aa16.66■□□□□ 0.26
NUP50-207ENST00000424634 GANABQ14697 944 aaKnown RBP16.66■□□□□ 0.26
NUP50-207ENST00000424634 MLC1Q15049 377 aa16.66■□□□□ 0.26
NUP50-207ENST00000424634 TMEM44Q2T9K0 475 aa16.66■□□□□ 0.26
NUP50-207ENST00000424634 VPS26BQ4G0F5 336 aa16.66■□□□□ 0.26
NUP50-207ENST00000424634 FIGNL1Q6PIW4 674 aa16.66■□□□□ 0.26
NUP50-207ENST00000424634 LRIG3Q6UXM1 1119 aa16.66■□□□□ 0.26
NUP50-207ENST00000424634 SZRD1Q7Z422 152 aa16.66■□□□□ 0.26
NUP50-207ENST00000424634 R3HCC1LQ7Z5L2 792 aaKnown RBP16.66■□□□□ 0.26
NUP50-207ENST00000424634 LUZP2Q86TE4 346 aa16.66■□□□□ 0.26
NUP50-207ENST00000424634 KIF18BQ86Y91 864 aa16.66■□□□□ 0.26
NUP50-207ENST00000424634 GRAMD2AQ8IUY3 354 aa16.66■□□□□ 0.26
NUP50-207ENST00000424634 MREGQ8N565 214 aa16.66■□□□□ 0.26
NUP50-207ENST00000424634 FAM120BQ96EK7 910 aaKnown RBP16.66■□□□□ 0.26
NUP50-207ENST00000424634 MS4A4EQ96PG1 132 aa16.66■□□□□ 0.26
NUP50-207ENST00000424634 PARD6BQ9BYG5 372 aa16.66■□□□□ 0.26
NUP50-207ENST00000424634 CLEC4MQ9H2X3 399 aaPredicted RBP16.66■□□□□ 0.26
NUP50-207ENST00000424634 PTGES2Q9H7Z7 377 aa16.66■□□□□ 0.26
NUP50-207ENST00000424634 A0A1W2PRB8 838 aa16.65■□□□□ 0.26
NUP50-207ENST00000424634 TMEM114B3SHH9 223 aa16.65■□□□□ 0.26
NUP50-207ENST00000424634 ALG1L2C9J202 215 aa16.65■□□□□ 0.26
NUP50-207ENST00000424634 ITM2AO43736 263 aa16.65■□□□□ 0.26
NUP50-207ENST00000424634 SKAP2O75563 359 aaPredicted RBP16.65■□□□□ 0.26
NUP50-207ENST00000424634 LYPLA1O75608 230 aaPredicted RBP16.65■□□□□ 0.26
NUP50-207ENST00000424634 OXSR1O95747 527 aaPredicted RBP16.65■□□□□ 0.26
NUP50-207ENST00000424634 EPXP11678 715 aa16.65■□□□□ 0.26
NUP50-207ENST00000424634 TBXA2RP21731 343 aa16.65■□□□□ 0.26
NUP50-207ENST00000424634 IST1P53990 364 aa16.65■□□□□ 0.26
NUP50-207ENST00000424634 DIO3P55073 304 aa16.65■□□□□ 0.26
NUP50-207ENST00000424634 ZNF844Q08AG5 666 aa16.65■□□□□ 0.26
NUP50-207ENST00000424634 GLYR1Q49A26 553 aaPredicted RBP16.65■□□□□ 0.26
NUP50-207ENST00000424634 ATP6AP1LQ52LC2 224 aa16.65■□□□□ 0.26
NUP50-207ENST00000424634 IL23RQ5VWK5 629 aa16.65■□□□□ 0.26
NUP50-207ENST00000424634 NUDCD3Q8IVD9 361 aa16.65■□□□□ 0.26
NUP50-207ENST00000424634 KRTCAP2Q8N6L1 136 aa16.65■□□□□ 0.26
NUP50-207ENST00000424634 FIG4Q92562 907 aa16.65■□□□□ 0.26
NUP50-207ENST00000424634 PKNOX2Q96KN3 472 aa16.65■□□□□ 0.26
NUP50-207ENST00000424634 NPAS1Q99742 590 aa16.65■□□□□ 0.26
NUP50-207ENST00000424634 KLHDC3Q9BQ90 382 aa16.65■□□□□ 0.26
NUP50-207ENST00000424634 RBM24Q9BX46 236 aaKnown RBP16.65■□□□□ 0.26
NUP50-207ENST00000424634 GALNT8Q9NY28 637 aa16.65■□□□□ 0.26
NUP50-207ENST00000424634 VPS13CQ709C8 3753 aa16.64■□□□□ 0.25
NUP50-207ENST00000424634 A0A1W2PNV4 684 aa16.64■□□□□ 0.25
NUP50-207ENST00000424634 WDR91A4D1P6 747 aa16.64■□□□□ 0.25
NUP50-207ENST00000424634 A8MXE2 369 aa16.64■□□□□ 0.25
NUP50-207ENST00000424634 H3BML4 177 aa16.64■□□□□ 0.25
NUP50-207ENST00000424634 HMGN2P05204 90 aaKnown RBP16.64■□□□□ 0.25
NUP50-207ENST00000424634 NGFRP08138 427 aa16.64■□□□□ 0.25
NUP50-207ENST00000424634 ALOX5P09917 674 aa16.64■□□□□ 0.25
NUP50-207ENST00000424634 MAPK1P28482 360 aa16.64■□□□□ 0.25
NUP50-207ENST00000424634 HPCAL1P37235 193 aa16.64■□□□□ 0.25
NUP50-207ENST00000424634 SERPINB4P48594 390 aa16.64■□□□□ 0.25
NUP50-207ENST00000424634 SORDQ00796 357 aa16.64■□□□□ 0.25
NUP50-207ENST00000424634 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.64■□□□□ 0.25
NUP50-207ENST00000424634 CCNJQ5T5M9 372 aa16.64■□□□□ 0.25
NUP50-207ENST00000424634 ZCCHC12Q6PEW1 402 aa16.64■□□□□ 0.25
NUP50-207ENST00000424634 CDC20BQ86Y33 519 aa16.64■□□□□ 0.25
NUP50-207ENST00000424634 RIMKLAQ8IXN7 391 aa16.64■□□□□ 0.25
NUP50-207ENST00000424634 MEIOBQ8N635 442 aa16.64■□□□□ 0.25
NUP50-207ENST00000424634 GATSQ8NAP1 163 aa16.64■□□□□ 0.25
NUP50-207ENST00000424634 FNDC5Q8NAU1 212 aa16.64■□□□□ 0.25
NUP50-207ENST00000424634 GOT1L1Q8NHS2 421 aaPredicted RBP16.64■□□□□ 0.25
NUP50-207ENST00000424634 ZBTB9Q96C00 473 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms