RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 C5AR2Q9P296 337 aa14.23□□□□□ -0.13
C9orf3-204ENST00000424143 MALT1Q9UDY8 824 aa14.23□□□□□ -0.13
C9orf3-204ENST00000424143 SLC23A1Q9UHI7 598 aa14.23□□□□□ -0.13
C9orf3-204ENST00000424143 U3KQ87 197 aa14.23□□□□□ -0.13
C9orf3-204ENST00000424143 LOC105371267A0A1B0GV96 52 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 CD8B2A6NJW9 211 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 H7BY64 318 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 KPNA3O00505 521 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-204ENST00000424143 LZTS3O60299 673 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-204ENST00000424143 ADH1AP07327 375 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 CD8BP10966 210 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 DYRK1AQ13627 763 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 LASP1Q14847 261 aaKnown RBP14.22□□□□□ -0.13
C9orf3-204ENST00000424143 NTRK2Q16620 822 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 FAM205BPQ63HN1 556 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 NIPAL3Q6P499 406 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 GDF7Q7Z4P5 450 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 FGD2Q7Z6J4 655 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 LUZP2Q86TE4 346 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 REM2Q8IYK8 340 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-204ENST00000424143 MS4A15Q8N5U1 240 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 SPERTQ8NA61 448 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 ZNF680Q8NEM1 530 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 HAVCR2Q8TDQ0 301 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 ZNF431Q8TF32 576 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-204ENST00000424143 OR8D1Q8WZ84 308 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 RAB7BQ96AH8 199 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 ARRDC3Q96B67 414 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 PRAP1Q96NZ9 151 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 TIMP4Q99727 224 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 ACTRT3Q9BYD9 372 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 LINC00597Q9H2U6 94 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 UBQLN3Q9H347 655 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 MTHFD2LQ9H903 347 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-204ENST00000424143 HINT3Q9NQE9 182 aaKnown RBP14.22□□□□□ -0.13
C9orf3-204ENST00000424143 PRDM7Q9NQW5 492 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 WDR70Q9NW82 654 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 HAO2Q9NYQ3 351 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 CHST2Q9Y4C5 530 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 NPTNQ9Y639 398 aa14.22□□□□□ -0.13
C9orf3-204ENST00000424143 A0A0G2JK05 382 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 EDDM13A0A1B0GTR0 161 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 C2orf92A0A1B0GVN3 265 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 LRRTM2O43300 516 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 NCR1O76036 304 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 UBL3O95164 117 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 APOL3O95236 402 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 MT-ND5P03915 603 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 THBS1P07996 1170 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 F3P13726 295 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 HIST1H1TP22492 207 aaPredicted RBP14.21□□□□□ -0.13
C9orf3-204ENST00000424143 MPIP34949 423 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 MAP4K2Q12851 820 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 ZNF791Q3KP31 576 aaPredicted RBP14.21□□□□□ -0.13
C9orf3-204ENST00000424143 SLC36A2Q495M3 483 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 CLLU1Q5K131 121 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 WDR45BQ5MNZ6 344 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 IDNKQ5T6J7 187 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 SLC22A10Q63ZE4 541 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 SLC30A6Q6NXT4 461 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 SLC48A1Q6P1K1 146 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 SFXN4Q6P4A7 337 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 ABHD17CQ6PCB6 329 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 ZNF793Q6ZN11 406 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 LNX2Q8N448 690 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 PMM1Q92871 262 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 SLC41A3Q96GZ6 507 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 CITED4Q96RK1 184 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 ACAT2Q9BWD1 397 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 AICDAQ9GZX7 198 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 OR51J1Q9H342 316 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 HEXA-AS1Q9H8Q6 139 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 LYARQ9NX58 379 aaKnown RBP14.21□□□□□ -0.13
C9orf3-204ENST00000424143 CNIH4Q9P003 139 aa14.21□□□□□ -0.13
C9orf3-204ENST00000424143 MEIKINA0A087WXM9 373 aa14.2□□□□□ -0.14
C9orf3-204ENST00000424143 TBC1D3KA0A087X1G2 549 aa14.2□□□□□ -0.14
C9orf3-204ENST00000424143 A0A1W2PR48 441 aa14.2□□□□□ -0.14
C9orf3-204ENST00000424143 SMIM30A4D0T7 59 aa14.2□□□□□ -0.14
C9orf3-204ENST00000424143 TBC1D3BA6NDS4 549 aa14.2□□□□□ -0.14
C9orf3-204ENST00000424143 TBC1D3FA6NER0 549 aaPredicted RBP14.2□□□□□ -0.14
C9orf3-204ENST00000424143 SLC22A31A6NKX4 558 aa14.2□□□□□ -0.14
C9orf3-204ENST00000424143 ZNF749O43361 778 aa14.2□□□□□ -0.14
C9orf3-204ENST00000424143 LCMT2O60294 686 aaKnown RBP14.2□□□□□ -0.14
C9orf3-204ENST00000424143 FMO6PO60774 539 aa14.2□□□□□ -0.14
C9orf3-204ENST00000424143 KCNJ13O60928 360 aa14.2□□□□□ -0.14
C9orf3-204ENST00000424143 PAHP00439 452 aa14.2□□□□□ -0.14
C9orf3-204ENST00000424143 SAGP10523 405 aaPredicted RBP14.2□□□□□ -0.14
C9orf3-204ENST00000424143 ADRB3P13945 408 aa14.2□□□□□ -0.14
C9orf3-204ENST00000424143 PAICSP22234 425 aaKnown RBP14.2□□□□□ -0.14
C9orf3-204ENST00000424143 ATP6V1E1P36543 226 aa14.2□□□□□ -0.14
C9orf3-204ENST00000424143 RGS8P57771 180 aaPredicted RBP14.2□□□□□ -0.14
C9orf3-204ENST00000424143 ERVK-21P61565 698 aa14.2□□□□□ -0.14
C9orf3-204ENST00000424143 HSF2Q03933 536 aa14.2□□□□□ -0.14
C9orf3-204ENST00000424143 RGS1Q08116 209 aa14.2□□□□□ -0.14
C9orf3-204ENST00000424143 BAMBIQ13145 260 aa14.2□□□□□ -0.14
C9orf3-204ENST00000424143 HNRNPA1L2Q32P51 320 aaKnown RBP14.2□□□□□ -0.14
C9orf3-204ENST00000424143 EIPR1Q53HC9 387 aa14.2□□□□□ -0.14
C9orf3-204ENST00000424143 C6orf132Q5T0Z8 1188 aa14.2□□□□□ -0.14
C9orf3-204ENST00000424143 TBC1D3GQ6DHY5 549 aa14.2□□□□□ -0.14
C9orf3-204ENST00000424143 PLEKHM3Q6ZWE6 761 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms