RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 MBD3L5A6NJ08 208 aaPredicted RBP16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 CD8B2A6NJW9 211 aa16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 SDHDO14521 159 aa16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 SCN2BO60939 215 aa16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 ALOX5P09917 674 aa16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 DDX5P17844 614 aaKnown RBP16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 TIMP3P35625 211 aa16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 CCT3P49368 545 aaKnown RBP16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 PSMD4P55036 377 aaKnown RBP16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 DSCR4P56555 118 aaPredicted RBP16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 CLDN18P56856 261 aa16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 HBA1P69905 142 aa16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 PHC1P78364 1004 aa16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 PRR5P85299 388 aa16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 CCNJQ5T5M9 372 aa16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 OR4F3Q6IEY1 312 aa16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 LACC1Q8IV20 430 aa16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 CLECL1Q8IZS7 167 aa16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 NATD1Q8N6N6 113 aa16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 MBD3L2Q8NHZ7 208 aaPredicted RBP16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 ZPLD1Q8TCW7 415 aa16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 ARL8AQ96BM9 186 aa16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 TRIB1Q96RU8 372 aa16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 ATAD3AQ9NVI7 634 aa16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 SNX8Q9Y5X2 465 aa16.16■□□□□ 0.18
SBDSP1-202ENST00000423945 IGLV3-32A0A0A0MS00 114 aa16.15■□□□□ 0.18
SBDSP1-202ENST00000423945 OXSR1O95747 527 aaPredicted RBP16.15■□□□□ 0.18
SBDSP1-202ENST00000423945 ANGPTL1O95841 491 aa16.15■□□□□ 0.18
SBDSP1-202ENST00000423945 ALDOCP09972 364 aaKnown RBP16.15■□□□□ 0.18
SBDSP1-202ENST00000423945 ZNF708P17019 499 aa16.15■□□□□ 0.18
SBDSP1-202ENST00000423945 PRIM2P49643 509 aa16.15■□□□□ 0.18
SBDSP1-202ENST00000423945 ZNF136P52737 540 aa16.15■□□□□ 0.18
SBDSP1-202ENST00000423945 DLX5P56178 289 aa16.15■□□□□ 0.18
SBDSP1-202ENST00000423945 CASP8Q14790 479 aa16.15■□□□□ 0.18
SBDSP1-202ENST00000423945 PGS1Q32NB8 556 aa16.15■□□□□ 0.18
SBDSP1-202ENST00000423945 CDC73Q6P1J9 531 aa16.15■□□□□ 0.18
SBDSP1-202ENST00000423945 COX18Q8N8Q8 333 aa16.15■□□□□ 0.18
SBDSP1-202ENST00000423945 C9orf106Q8NAJ2 232 aa16.15■□□□□ 0.18
SBDSP1-202ENST00000423945 CDS1Q92903 461 aa16.15■□□□□ 0.18
SBDSP1-202ENST00000423945 SFXN2Q96NB2 322 aa16.15■□□□□ 0.18
SBDSP1-202ENST00000423945 PRPF18Q99633 342 aaKnown RBP16.15■□□□□ 0.18
SBDSP1-202ENST00000423945 KLHDC3Q9BQ90 382 aa16.15■□□□□ 0.18
SBDSP1-202ENST00000423945 PIGUQ9H490 435 aa16.15■□□□□ 0.18
SBDSP1-202ENST00000423945 SERHL2Q9H4I8 314 aa16.15■□□□□ 0.18
SBDSP1-202ENST00000423945 SDHAF3Q9NRP4 125 aa16.15■□□□□ 0.18
SBDSP1-202ENST00000423945 DUSP22Q9NRW4 184 aa16.15■□□□□ 0.18
SBDSP1-202ENST00000423945 ENO4A6NNW6 628 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 HSPB2A8KAH6 182 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 ALG1L2C9J202 215 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 NGFRP08138 427 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 LBPP18428 481 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 TBXA2RP21731 343 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 CHMP24386 653 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 CLDN15P56746 228 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 POU6F2P78424 691 aaPredicted RBP16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 OCRLQ01968 901 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 SRYQ05066 204 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 TP53BP2Q13625 1128 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 HSPB2Q16082 182 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 SLC25A35Q3KQZ1 300 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 LSM12Q3MHD2 195 aaKnown RBP16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 OGFOD2Q6N063 350 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 GDF7Q7Z4P5 450 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 DMRTC2Q8IXT2 367 aaPredicted RBP16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 LRRC34Q8IZ02 419 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 CLEC4FQ8N1N0 589 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 OR56A1Q8NGH5 318 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 OR5AK3PQ8NH89 298 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 SFXN5Q8TD22 340 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 JADE3Q92613 823 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 C1GALT1C1Q96EU7 318 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 STACQ99469 402 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 BTBD2Q9BX70 525 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 ACTRT3Q9BYD9 372 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 TBL1XR1Q9BZK7 514 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 RUBCNLQ9H714 662 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 CALHM2Q9HA72 323 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 GIN1Q9NXP7 522 aa16.14■□□□□ 0.17
SBDSP1-202ENST00000423945 FAM47E-STBD1D6RA91 191 aa16.13■□□□□ 0.17
SBDSP1-202ENST00000423945 HK1P19367 917 aa16.13■□□□□ 0.17
SBDSP1-202ENST00000423945 KRTAP10-9P60411 292 aa16.13■□□□□ 0.17
SBDSP1-202ENST00000423945 C17orf67Q0P5P2 114 aa16.13■□□□□ 0.17
SBDSP1-202ENST00000423945 ENPP6Q6UWR7 440 aa16.13■□□□□ 0.17
SBDSP1-202ENST00000423945 KIRREL3Q8IZU9 778 aa16.13■□□□□ 0.17
SBDSP1-202ENST00000423945 GATSQ8NAP1 163 aa16.13■□□□□ 0.17
SBDSP1-202ENST00000423945 OR8J2Q8NGG1 315 aa16.13■□□□□ 0.17
SBDSP1-202ENST00000423945 OR5M1Q8NGP8 315 aa16.13■□□□□ 0.17
SBDSP1-202ENST00000423945 TEX37Q96LM6 180 aa16.13■□□□□ 0.17
SBDSP1-202ENST00000423945 UCN2Q96RP3 112 aa16.13■□□□□ 0.17
SBDSP1-202ENST00000423945 NPAS1Q99742 590 aa16.13■□□□□ 0.17
SBDSP1-202ENST00000423945 DPY30Q9C005 99 aa16.13■□□□□ 0.17
SBDSP1-202ENST00000423945 WDR55Q9H6Y2 383 aaPredicted RBP16.13■□□□□ 0.17
SBDSP1-202ENST00000423945 NEUROD4Q9HD90 331 aa16.13■□□□□ 0.17
SBDSP1-202ENST00000423945 THAP1Q9NVV9 213 aa16.13■□□□□ 0.17
SBDSP1-202ENST00000423945 CLCF1Q9UBD9 225 aa16.13■□□□□ 0.17
SBDSP1-202ENST00000423945 MARCOQ9UEW3 520 aaPredicted RBP16.13■□□□□ 0.17
SBDSP1-202ENST00000423945 POLQO75417 2590 aa16.12■□□□□ 0.17
SBDSP1-202ENST00000423945 OR2M5A3KFT3 312 aa16.12■□□□□ 0.17
SBDSP1-202ENST00000423945 CLCA1A8K7I4 914 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms