RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 ANKRD9Q96BM1 317 aaPredicted RBP13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 COX4I2Q96KJ9 171 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 SPACA7Q96KW9 195 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 ZNF582Q96NG8 517 aaPredicted RBP13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 SLC38A3Q99624 504 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 DSN1Q9H410 356 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 BAIAP2Q9UQB8 552 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 FITM1A5D6W6 292 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 ZNF860A6NHJ4 632 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 METTL15A6NJ78 407 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 STK25O00506 426 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 CHST10O43529 356 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 TPST2O60704 377 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 LDB3O75112 727 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 NR4A1P22736 598 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 MTNR1AP48039 350 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 PRKCDQ05655 676 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 ZNF155Q12901 538 aaPredicted RBP13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 NXNL2Q5VZ03 156 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 ATCAYQ86WG3 371 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 NLGN4XQ8N0W4 816 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 SLC34A3Q8N130 599 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 CLIP4Q8N3C7 705 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 POGLUT1Q8NBL1 392 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 ZDHHC12Q96GR4 267 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 RBM18Q96H35 190 aaKnown RBP13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 IER2Q9BTL4 223 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 ZBTB20Q9HC78 741 aaPredicted RBP13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 CRNNQ9UBG3 495 aaPredicted RBP13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 WNT16Q9UBV4 365 aa13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 MRPS2Q9Y399 296 aaKnown RBP13.53□□□□□ -0.24
HLA-DPA1-242ENST00000419277 A0A075B6Q4 140 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 RDH16O75452 317 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SULT1C4O75897 302 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 RCBTB2O95199 551 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CELA2BP08218 269 aaPredicted RBP13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 HSMCR30P0CW71 290 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 TRHRP34981 398 aaPredicted RBP13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 PTGER1P34995 402 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 IDUAP35475 653 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SOX18P35713 384 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ETV6P41212 452 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 PPP5CP53041 499 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 MLLT10P55197 1068 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 WNT4P56705 351 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 STARD6P59095 220 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 STX4Q12846 297 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 KRR1Q13601 381 aaKnown RBP13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 GPR68Q15743 365 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 PGGHGQ32M88 737 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 MRPL2Q5T653 305 aaKnown RBP13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 OGFOD3Q6PK18 319 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 IGFN1Q86VF2 1251 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 KIF18BQ86Y91 864 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 OR4N5Q8IXE1 308 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 NRMQ8IXM6 262 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 MFSD4AQ8N468 514 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ANKK1Q8NFD2 765 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ZG16BQ96DA0 208 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 HSPBAP1Q96EW2 488 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ABHD8Q96I13 439 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 FAM46AQ96IP4 442 aaKnown RBP13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 OPALINQ96PE5 141 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 TRIM2Q9C040 744 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 TTYH1Q9H313 450 aaPredicted RBP13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 TMEM27Q9HBJ8 222 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 Q9N2J8 555 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 GALNT8Q9NY28 637 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 STUB1Q9UNE7 303 aa13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 GPR55Q9Y2T6 319 aaPredicted RBP13.52□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SGK494L7N484 410 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 M0R129 80 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ARHGAP33O14559 1287 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CHP2O43745 196 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CSO75390 466 aaKnown RBP13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CBX7O95931 251 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 GAAP10253 952 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 TYRP1P17643 537 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 BMP7P18075 431 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 DRD5P21918 477 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 GRK5P34947 590 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 MLLT3P42568 568 aaPredicted RBP13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CTBP2P56545 445 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 LSM3P62310 102 aaKnown RBP13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 BNC1Q01954 994 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 DSG2Q14126 1118 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 GRM7Q14831 915 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 TSTQ16762 297 aaKnown RBP13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 FLYWCH1Q4VC44 716 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ACSM5Q6NUN0 579 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 TMPRSS11FQ6ZWK6 438 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 PRSS41Q7RTY9 318 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ZNF550Q7Z398 422 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ZNF440Q8IYI8 595 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 LSMEM1Q8N8F7 131 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 PSD4Q8NDX1 1056 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 OR7G1Q8NGA0 311 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 OR5T3Q8NGG3 340 aa13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 RPL3LQ92901 407 aaKnown RBP13.51□□□□□ -0.25
HLA-DPA1-242ENST00000419277 RIT1Q92963 219 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms