RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 CTSSP25774 331 aa14.92□□□□□ -0.02
LINC00404-201ENST00000418660 LCN1P31025 176 aa14.92□□□□□ -0.02
LINC00404-201ENST00000418660 DLX5P56178 289 aa14.92□□□□□ -0.02
LINC00404-201ENST00000418660 CLDN18P56856 261 aa14.92□□□□□ -0.02
LINC00404-201ENST00000418660 STX3Q13277 289 aa14.92□□□□□ -0.02
LINC00404-201ENST00000418660 GANABQ14697 944 aaKnown RBP14.92□□□□□ -0.02
LINC00404-201ENST00000418660 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.92□□□□□ -0.02
LINC00404-201ENST00000418660 FIGNL1Q6PIW4 674 aa14.92□□□□□ -0.02
LINC00404-201ENST00000418660 APOOLQ6UXV4 268 aa14.92□□□□□ -0.02
LINC00404-201ENST00000418660 ADGRE4PQ86SQ3 457 aa14.92□□□□□ -0.02
LINC00404-201ENST00000418660 COX18Q8N8Q8 333 aa14.92□□□□□ -0.02
LINC00404-201ENST00000418660 FBXO30Q8TB52 745 aa14.92□□□□□ -0.02
LINC00404-201ENST00000418660 NUDT8Q8WV74 236 aa14.92□□□□□ -0.02
LINC00404-201ENST00000418660 LRRC46Q96FV0 321 aa14.92□□□□□ -0.02
LINC00404-201ENST00000418660 PPP1R36Q96LQ0 422 aa14.92□□□□□ -0.02
LINC00404-201ENST00000418660 SORT1Q99523 831 aa14.92□□□□□ -0.02
LINC00404-201ENST00000418660 YIPF4Q9BSR8 244 aa14.92□□□□□ -0.02
LINC00404-201ENST00000418660 PIGUQ9H490 435 aa14.92□□□□□ -0.02
LINC00404-201ENST00000418660 AKTIPQ9H8T0 292 aa14.92□□□□□ -0.02
LINC00404-201ENST00000418660 HHATLQ9HCP6 504 aa14.92□□□□□ -0.02
LINC00404-201ENST00000418660 GIN1Q9NXP7 522 aa14.92□□□□□ -0.02
LINC00404-201ENST00000418660 SNX8Q9Y5X2 465 aa14.92□□□□□ -0.02
LINC00404-201ENST00000418660 PKDREJQ9NTG1 2253 aa14.92□□□□□ -0.02
LINC00404-201ENST00000418660 CLCA1A8K7I4 914 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 ALG1L2C9J202 215 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 LINC01387J3KSC0 135 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 ERLIN1O75477 346 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 C6orf47O95873 294 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 IL18BPO95998 194 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 PEPDP12955 493 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 CAPN3P20807 821 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 TBXA2RP21731 343 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 OPRM1P35372 400 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 CCT3P49368 545 aaKnown RBP14.91□□□□□ -0.02
LINC00404-201ENST00000418660 ASCL1P50553 236 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 DGKQP52824 942 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 FBXL19-AS1Q494R0 122 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 GLYR1Q49A26 553 aaPredicted RBP14.91□□□□□ -0.02
LINC00404-201ENST00000418660 HHATQ5VTY9 493 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 ARSKQ6UWY0 536 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 CAMKMTQ7Z624 323 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 C9orf106Q8NAJ2 232 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 OR56A1Q8NGH5 318 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 OR4C3Q8NH37 302 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 GOT1L1Q8NHS2 421 aaPredicted RBP14.91□□□□□ -0.02
LINC00404-201ENST00000418660 JADE3Q92613 823 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 WNT2BQ93097 391 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 MOAP1Q96BY2 351 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 ZFP3Q96NJ6 502 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 STACQ99469 402 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 TM9SF2Q99805 663 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 PAIP2Q9BPZ3 127 aaKnown RBP14.91□□□□□ -0.02
LINC00404-201ENST00000418660 G6PC3Q9BUM1 346 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 DUSP26Q9BV47 211 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 BTBD2Q9BX70 525 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 CXorf36Q9H7Y0 433 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 NEUROD4Q9HD90 331 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 DUSP22Q9NRW4 184 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 L3MBTL1Q9Y468 752 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 APCP25054 2843 aa14.91□□□□□ -0.02
LINC00404-201ENST00000418660 ABCA12Q86UK0 2595 aa14.9□□□□□ -0.02
LINC00404-201ENST00000418660 SOX30O94993 753 aa14.9□□□□□ -0.02
LINC00404-201ENST00000418660 RCBTB2O95199 551 aa14.9□□□□□ -0.02
LINC00404-201ENST00000418660 OXSR1O95747 527 aaPredicted RBP14.9□□□□□ -0.02
LINC00404-201ENST00000418660 TMIGD3P0DMS9 266 aaPredicted RBP14.9□□□□□ -0.02
LINC00404-201ENST00000418660 PEX19P40855 299 aa14.9□□□□□ -0.02
LINC00404-201ENST00000418660 KRTAP10-9P60411 292 aa14.9□□□□□ -0.02
LINC00404-201ENST00000418660 POU6F2P78424 691 aaPredicted RBP14.9□□□□□ -0.02
LINC00404-201ENST00000418660 BST1Q10588 318 aa14.9□□□□□ -0.02
LINC00404-201ENST00000418660 LASP1Q14847 261 aaKnown RBP14.9□□□□□ -0.02
LINC00404-201ENST00000418660 SPDYE7PQ495Y7 208 aa14.9□□□□□ -0.02
LINC00404-201ENST00000418660 RAET1LQ5VY80 246 aa14.9□□□□□ -0.02
LINC00404-201ENST00000418660 CDC73Q6P1J9 531 aa14.9□□□□□ -0.02
LINC00404-201ENST00000418660 GALNT10Q86SR1 603 aa14.9□□□□□ -0.02
LINC00404-201ENST00000418660 LRRC34Q8IZ02 419 aa14.9□□□□□ -0.02
LINC00404-201ENST00000418660 ANKRD42Q8N9B4 389 aa14.9□□□□□ -0.02
LINC00404-201ENST00000418660 SFXN5Q8TD22 340 aa14.9□□□□□ -0.02
LINC00404-201ENST00000418660 RNASE6Q93091 150 aaKnown RBP14.9□□□□□ -0.02
LINC00404-201ENST00000418660 C1GALT1C1Q96EU7 318 aa14.9□□□□□ -0.02
LINC00404-201ENST00000418660 OTUB1Q96FW1 271 aaPredicted RBP14.9□□□□□ -0.02
LINC00404-201ENST00000418660 CHMP6Q96FZ7 201 aa14.9□□□□□ -0.02
LINC00404-201ENST00000418660 SH3GL2Q99962 352 aa14.9□□□□□ -0.02
LINC00404-201ENST00000418660 ZNF559Q9BR84 538 aa14.9□□□□□ -0.02
LINC00404-201ENST00000418660 ACTRT3Q9BYD9 372 aa14.9□□□□□ -0.02
LINC00404-201ENST00000418660 UBQLN4Q9NRR5 601 aa14.9□□□□□ -0.02
LINC00404-201ENST00000418660 FBXO34Q9NWN3 711 aa14.9□□□□□ -0.02
LINC00404-201ENST00000418660 CLCF1Q9UBD9 225 aa14.9□□□□□ -0.02
LINC00404-201ENST00000418660 FOXD3Q9UJU5 478 aaPredicted RBP14.9□□□□□ -0.02
LINC00404-201ENST00000418660 FAF1Q9UNN5 650 aaPredicted RBP14.9□□□□□ -0.02
LINC00404-201ENST00000418660 FBN2P35556 2912 aa14.89□□□□□ -0.03
LINC00404-201ENST00000418660 TMEM120BA0PK00 339 aa14.89□□□□□ -0.03
LINC00404-201ENST00000418660 OR2M5A3KFT3 312 aa14.89□□□□□ -0.03
LINC00404-201ENST00000418660 CFLARO15519 480 aa14.89□□□□□ -0.03
LINC00404-201ENST00000418660 HCRTR2O43614 444 aa14.89□□□□□ -0.03
LINC00404-201ENST00000418660 NDUFB5O43674 189 aa14.89□□□□□ -0.03
LINC00404-201ENST00000418660 KRT16P08779 473 aa14.89□□□□□ -0.03
LINC00404-201ENST00000418660 POU3F2P20265 443 aaPredicted RBP14.89□□□□□ -0.03
LINC00404-201ENST00000418660 UQCRC1P31930 480 aa14.89□□□□□ -0.03
LINC00404-201ENST00000418660 SLC18A1P54219 525 aa14.89□□□□□ -0.03
LINC00404-201ENST00000418660 WDR4P57081 412 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms