RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 GALK2Q01415 458 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 EIF4HQ15056 248 aaKnown RBP12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 CDK10Q15131 360 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 SMAD2Q15796 467 aaKnown RBP12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 TRMT12Q53H54 448 aaKnown RBP12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 HES5Q5TA89 166 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 SLC39A5Q6ZMH5 540 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 YAF2Q8IY57 180 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 VWA5B2Q8N398 1253 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 LINC01555Q8NAE3 123 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 OR13C2Q8NGS9 318 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 KXD1Q9BQD3 176 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 HCAR1Q9BXC0 346 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 MAU2Q9Y6X3 613 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 TDRD6O60522 2096 aaKnown RBP12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 TSPAN4O14817 238 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 RECKO95980 971 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 IGHA2P01877 340 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 ATF4P18848 351 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 ACVR2AP27037 513 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 GIFP27352 417 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 RPL3P39023 403 aaKnown RBP12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 BCL6P41182 706 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 OR12D2P58182 307 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 RPA4Q13156 261 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 ILKQ13418 452 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 LINGO2Q7L985 606 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 CDH24Q86UP0 819 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 RAB42Q8N4Z0 105 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 HCAR2Q8TDS4 363 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 FBLIM1Q8WUP2 373 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 PMEPA1Q969W9 287 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 QRFPRQ96P65 431 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 LYSMD1Q96S90 227 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 HINT3Q9NQE9 182 aaKnown RBP12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 TMEM45AQ9NWC5 275 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 MRPL39Q9NYK5 338 aaKnown RBP12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 FLVCR2Q9UPI3 526 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 REV3LO60673 3130 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 PLXND1Q9Y4D7 1925 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 SNTNA6NMZ2 147 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 IMPA2O14732 288 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 POLR1CO15160 346 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 PROM1O43490 865 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 SCO2O43819 266 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 CSN2P05814 226 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 SLC1A3P43003 542 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 TM4SF4P48230 202 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 E2F1Q01094 437 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 SLC36A4Q6YBV0 504 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 ERN2Q76MJ5 926 aaKnown RBP12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 METTL3Q86U44 580 aaKnown RBP12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 PROKR2Q8NFJ6 384 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 MAGEB10Q96LZ2 347 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 OR7D2Q96RA2 312 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 SLC7A5P2Q9GIP4 190 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 CHST8Q9H2A9 424 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 CCDC59Q9P031 241 aaKnown RBP12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 CHD9Q3L8U1 2897 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 HYKKA2RU49 373 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 QSOX1O00391 747 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 SEMG1P04279 462 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 ACSL1P33121 698 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 BSGP35613 385 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 P2RY2P41231 377 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 KLHL22Q53GT1 634 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 PXDC1Q5TGL8 231 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 KIAA1324Q6UXG2 1013 aaKnown RBP12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 CXXC5Q7LFL8 322 aaKnown RBP12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 KLHL36Q8N4N3 616 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 LRRC17Q8N6Y2 441 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 SDR9C7Q8NEX9 313 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 OR52E4Q8NGH9 312 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 RSPRY1Q96DX4 576 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 MSANTD3Q96H12 275 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 MS4A8Q9BY19 250 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 PLEKHB1Q9UF11 243 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 CDC42EP2O14613 210 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 PPP1R3DO95685 299 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 HSD3B1P14060 373 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 HSD3B2P26439 372 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 UBE2MP61081 183 aaKnown RBP12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 KCNC3Q14003 757 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 DSG2Q14126 1118 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 KCNAB1Q14722 419 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 SLX4IPQ5VYV7 408 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 LAS2Q8IYD9 372 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 OR52L1Q8NGH7 329 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 PDCD1LG2Q9BQ51 273 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 MGAT4AQ9UM21 535 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 INSL6Q9Y581 213 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 GVINP1Q7Z2Y8 2422 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 A0A0B4J293 547 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 SMIM11AP58511 58 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 GPR50Q13585 617 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 SLC25A35Q3KQZ1 300 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 BHLHB9Q6PI77 547 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 PRSS41Q7RTY9 318 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 TBC1D19Q8N5T2 526 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 MRGPRX3Q96LB0 322 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms