RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 INMTO95050 263 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 SLC35E2P0CK97 266 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 C8orf89P0DMQ9 161 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 CPMP14384 443 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 SOX18P35713 384 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 CHI3L1P36222 383 aaPredicted RBP9.25□□□□□ -0.93
DDB1-202ENST00000414411 PRIM2P49643 509 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 EMP2P54851 167 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 ID2Q02363 134 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 EMX1Q04741 257 aaPredicted RBP9.25□□□□□ -0.93
DDB1-202ENST00000414411 NPRL3Q12980 569 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 DNASE1L3Q13609 305 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 MAD2L1BPQ15013 274 aaPredicted RBP9.25□□□□□ -0.93
DDB1-202ENST00000414411 ZNF630Q2M218 657 aaPredicted RBP9.25□□□□□ -0.93
DDB1-202ENST00000414411 IFI44LQ53G44 452 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 TMEM205Q6UW68 189 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 SLC16A12Q6ZSM3 486 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 RNF130Q86XS8 419 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 CCDC71Q8IV32 467 aaPredicted RBP9.25□□□□□ -0.93
DDB1-202ENST00000414411 SAMD14Q8IZD0 417 aaPredicted RBP9.25□□□□□ -0.93
DDB1-202ENST00000414411 C7orf57Q8NEG2 295 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 OR5AK3PQ8NH89 298 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 NFKBIDQ8NI38 313 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 FAR1Q8WVX9 515 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 FGF11Q92914 225 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 TSLPQ969D9 159 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 ZNF347Q96SE7 839 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 FUNDC2Q9BWH2 189 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 CCDC90BQ9GZT6 254 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 RAD21L1Q9H4I0 556 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 ACSS1Q9NUB1 689 aaPredicted RBP9.25□□□□□ -0.93
DDB1-202ENST00000414411 ETAA1Q9NY74 926 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 WARS2Q9UGM6 360 aaKnown RBP9.25□□□□□ -0.93
DDB1-202ENST00000414411 ENPP5Q9UJA9 477 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 TESMINQ9Y4I5 508 aa9.25□□□□□ -0.93
DDB1-202ENST00000414411 ZNF99A8MXY4 864 aaPredicted RBP9.24□□□□□ -0.93
DDB1-202ENST00000414411 PDPK1O15530 556 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 KRT75O95678 551 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 ATP1B1P05026 303 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 HEXBP07686 556 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 ARAFP10398 606 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 PORP16435 677 aaPredicted RBP9.24□□□□□ -0.93
DDB1-202ENST00000414411 DDX5P17844 614 aaKnown RBP9.24□□□□□ -0.93
DDB1-202ENST00000414411 CSNK2A2P19784 350 aaPredicted RBP9.24□□□□□ -0.93
DDB1-202ENST00000414411 TNFRSF1BP20333 461 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 SOAT1P35610 550 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 DLSTP36957 453 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 FEN1P39748 380 aaKnown RBP9.24□□□□□ -0.93
DDB1-202ENST00000414411 PCBP3P57721 371 aaKnown RBP9.24□□□□□ -0.93
DDB1-202ENST00000414411 RPS15P62841 145 aaKnown RBP9.24□□□□□ -0.93
DDB1-202ENST00000414411 CDK6Q00534 326 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 STX4Q12846 297 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 SERTAD2Q14140 314 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 MLC1Q15049 377 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 NSDHLQ15738 373 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 CRB2Q5IJ48 1285 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 CROCCP3Q8IVE0 287 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 CCDC116Q8IYX3 515 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 IL22RA1Q8N6P7 574 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 LZICQ8WZA0 190 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 HRASLS5Q96KN8 279 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 AMDHD1Q96NU7 426 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 MESP1Q9BRJ9 268 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 CRB3Q9BUF7 120 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 GLIPR2Q9H4G4 154 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 EPS8L2Q9H6S3 715 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 SCN3BQ9NY72 215 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 ERVK-18Q9QC07 812 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 AASSQ9UDR5 926 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 IL17BQ9UHF5 180 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 KCND3Q9UK17 655 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 ACAD8Q9UKU7 415 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 PTRH2Q9Y3E5 179 aaKnown RBP9.24□□□□□ -0.93
DDB1-202ENST00000414411 ZNF780BQ9Y6R6 833 aa9.24□□□□□ -0.93
DDB1-202ENST00000414411 LOC102723996A0A087X1L8 192 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 PRAMEF25A6NGN4 478 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 TNFRSF11BO00300 401 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 ALOX12BO75342 701 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 BCL10O95999 233 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 INHBBP09529 407 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 UQCRC2P22695 453 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 MMP11P24347 488 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 ACVR2AP27037 513 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 GALNSP34059 522 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 MPIP34949 423 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 KRT20P35900 424 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 RPP38P78345 283 aaKnown RBP9.23□□□□□ -0.93
DDB1-202ENST00000414411 LSM11P83369 360 aaKnown RBP eCLIP9.23□□□□□ -0.93
DDB1-202ENST00000414411 MGAT2Q10469 447 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 NPTX1Q15818 432 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 SMN1Q16637 294 aaKnown RBP9.23□□□□□ -0.93
DDB1-202ENST00000414411 MFSD4BQ5TF39 518 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 DGAT2L6Q6ZPD8 337 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 ANKRD13BQ86YJ7 626 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 LRRC25Q8N386 305 aaPredicted RBP9.23□□□□□ -0.93
DDB1-202ENST00000414411 OR4C15Q8NGM1 316 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 PSMA8Q8TAA3 256 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 GIPC3Q8TF64 312 aa9.23□□□□□ -0.93
DDB1-202ENST00000414411 GEMIN6Q8WXD5 167 aaKnown RBP9.23□□□□□ -0.93
DDB1-202ENST00000414411 NACC2Q96BF6 587 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms