RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 SPIN1Q9Y657 262 aaPredicted RBP3.85□□□□□ -1.79
CLK1-203ENST00000409769 KNL1Q8NG31 2342 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 THADAQ6YHU6 1953 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 MUC3AQ02505 3323 aa3.85□□□□□ -1.79
CLK1-203ENST00000409769 ZNF318Q5VUA4 2279 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 IGLV3-16A0A075B6K0 115 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 IGKV3D-20A0A0C4DH25 116 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 GLYATL1P3A0A0U1RQE8 302 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 A0A1W2PN81 502 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 A8MX80 341 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 GOLGA8KD6RF30 607 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 H3BQF6 201 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 GOLGA8TH3BQL2 631 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 STX7O15400 261 aaKnown RBP3.84□□□□□ -1.79
CLK1-203ENST00000409769 OR10H2O60403 315 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 RNASEH1O60930 286 aaKnown RBP3.84□□□□□ -1.79
CLK1-203ENST00000409769 CDH16O75309 829 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 SRP72O76094 671 aaKnown RBP3.84□□□□□ -1.79
CLK1-203ENST00000409769 WISP3O95389 354 aaPredicted RBP3.84□□□□□ -1.79
CLK1-203ENST00000409769 TBX6O95947 436 aaPredicted RBP3.84□□□□□ -1.79
CLK1-203ENST00000409769 SOD1P00441 154 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 PDGFBP01127 241 aaPredicted RBP3.84□□□□□ -1.79
CLK1-203ENST00000409769 DNTTP04053 509 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 IVLP07476 585 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 NR2F1P10589 423 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 RPS3P23396 243 aaKnown RBP eCLIP3.84□□□□□ -1.79
CLK1-203ENST00000409769 ITGA3P26006 1051 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 KRTAP5-9P26371 169 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 TEAD1P28347 426 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 CHRNA7P36544 502 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 SPAM1P38567 509 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 GP5P40197 560 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 SLC1A2P43004 574 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 MAGEA9P43362 315 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 SLCO1A2P46721 670 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 SERPINB9P50453 376 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 TPMTP51580 245 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 LIMK2P53671 638 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 ADARP55265 1226 aaKnown RBP3.84□□□□□ -1.79
CLK1-203ENST00000409769 GNB1P62873 340 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 CACNG1Q06432 222 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 PRKAA1Q13131 559 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 NFATC2Q13469 925 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 ZKSCAN8Q15776 578 aaPredicted RBP3.84□□□□□ -1.79
CLK1-203ENST00000409769 CHRNA6Q15825 494 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 KIAA1644Q3SXP7 199 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 ZNF876PQ49A33 203 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 TTC31Q49AM3 519 aaPredicted RBP3.84□□□□□ -1.79
CLK1-203ENST00000409769 FASTKD1Q53R41 847 aaKnown RBP3.84□□□□□ -1.79
CLK1-203ENST00000409769 TTMPQ5BVD1 217 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 AGBL2Q5U5Z8 902 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 NEPROQ6NW34 567 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 TIFABQ6ZNK6 161 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 SNX20Q7Z614 316 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 PTAR1Q7Z6K3 402 aaPredicted RBP3.84□□□□□ -1.79
CLK1-203ENST00000409769 CROCCP2Q86T23 111 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 LRRC6Q86X45 466 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 CACUL1Q86Y37 369 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 PIANPQ8IYJ0 282 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 HDDC3Q8N4P3 179 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 TRAM1L1Q8N609 369 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 OR10S1Q8NGN2 331 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 OR4L1Q8NH43 312 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 HSD17B8Q92506 261 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 LPGAT1Q92604 370 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 DTD2Q96FN9 168 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 SIPA1Q96FS4 1042 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 PGM2Q96G03 612 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 SENP5Q96HI0 755 aaPredicted RBP3.84□□□□□ -1.79
CLK1-203ENST00000409769 VPS39Q96JC1 886 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 VPS35Q96QK1 796 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 KLF6Q99612 283 aaPredicted RBP3.84□□□□□ -1.79
CLK1-203ENST00000409769 GPR22Q99680 433 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 CCDC77Q9BR77 488 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 VN1R1Q9GZP7 353 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 ABCG8Q9H221 673 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 ARRDC1-AS1Q9H2J1 176 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 RHOJQ9H4E5 214 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 MED4Q9NPJ6 270 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 DYRK4Q9NR20 520 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 FBXL12Q9NXK8 326 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 PKD2L2Q9NZM6 624 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 PSMC3IPQ9P2W1 217 aaPredicted RBP3.84□□□□□ -1.79
CLK1-203ENST00000409769 RHCGQ9UBD6 479 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 APPL1Q9UKG1 709 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 FBXO5Q9UKT4 447 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 SLC7A7Q9UM01 511 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 PTRH2Q9Y3E5 179 aaKnown RBP3.84□□□□□ -1.79
CLK1-203ENST00000409769 CACNA1EQ15878 2313 aa3.84□□□□□ -1.79
CLK1-203ENST00000409769 USP34Q70CQ2 3546 aa3.84□□□□□ -1.8
CLK1-203ENST00000409769 TDRD6O60522 2096 aaKnown RBP3.83□□□□□ -1.8
CLK1-203ENST00000409769 SDK1Q7Z5N4 2213 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 TRIOO75962 3097 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 IGHV1OR15-9A0A0B4J2B8 117 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 IQANK1A0A1B0GTG1 560 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 SMIM23A6NLE4 172 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 DUXAA6NLW8 204 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 HMGB1P1B2RPK0 211 aaPredicted RBP3.83□□□□□ -1.8
CLK1-203ENST00000409769 LATO43561 262 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 DCXO43602 365 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms