RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 GASTP01350 101 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 IGHV2-70P01814 119 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 HIST1H2ABP04908 130 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 ACAA1P09110 424 aaPredicted RBP9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 HNRNPCL4P0DMR1 293 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 PRF1P14222 555 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 ZNF3P17036 446 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 HNF1BP35680 557 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 ETV5P41161 510 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 GPR15P49685 360 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 RGS4P49798 205 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 SEC61A1P61619 476 aaKnown RBP9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 HMGCS1Q01581 520 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 ZNF155Q12901 538 aaPredicted RBP9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 IHHQ14623 411 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 RNF212Q495C1 297 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 FBXO48Q5FWF7 155 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 FAM78AQ5JUQ0 283 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 CEACAM20Q6UY09 585 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 LINGO4Q6UY18 593 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 BEND4Q6ZU67 534 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 HIST3H2AQ7L7L0 130 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 TMPRSS9Q7Z410 1059 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 MRGPREQ86SM8 312 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 STX12Q86Y82 276 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 NKAIN4Q8IVV8 208 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 SVBPQ8N300 66 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 TOMM5Q8N4H5 51 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 OR9Q2Q8NGE9 314 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 NEIL3Q8TAT5 605 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 WDR20Q8TBZ3 569 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 HAVCR2Q8TDQ0 301 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 HIST1H2ACQ93077 130 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 ELP4Q96EB1 424 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 ELMOD3Q96FG2 381 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 TEFMQ96QE5 360 aaKnown RBP9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 C1QTNF6Q9BXI9 259 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 ACPTQ9BZG2 426 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 PIGMQ9H3S5 423 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 RNF122Q9H9V4 155 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 NMNAT1Q9HAN9 279 aaPredicted RBP9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 PLEKHA1Q9HB21 404 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 NT5MQ9NPB1 228 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 RPS6KB2Q9UBS0 482 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 ZNF282Q9UDV7 671 aaPredicted RBP9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 ACSL6Q9UKU0 697 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 FZD4Q9ULV1 537 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 CHST2Q9Y4C5 530 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 LOC105369274A0A096LPK9 316 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 A0A1W2PRU2 124 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 LRRC72A6NJI9 287 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 FAAHO00519 579 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 HYAL3O43820 417 aaPredicted RBP9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 SUSD5O60279 629 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 TFP02787 698 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 RLN2P04090 185 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 HRGP04196 525 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 SRPRAP08240 638 aaKnown RBP9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 FBP1P09467 338 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 TFPIP10646 304 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 SRFP11831 508 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 EPB42P16452 691 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 RHOQP17081 205 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 AVPR2P30518 371 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 CHI3L1P36222 383 aaPredicted RBP9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 SMIM11AP58511 58 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 DSC2Q02487 901 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 RELQ04864 619 aaPredicted RBP9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 TEAD2Q15562 447 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 SF1Q15637 639 aaKnown RBP9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 ZNF124Q15973 351 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 XKR6Q5GH73 641 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 CTSL3PQ5NE16 218 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 SDHAF4Q5VUM1 108 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 TANGO2Q6ICL3 276 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 NCEH1Q6PIU2 408 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 ZNF621Q6ZSS3 439 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 TMUB2Q71RG4 321 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 GAREM2Q75VX8 874 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 OR4N4Q8N0Y3 316 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 PNPLA1Q8N8W4 532 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 SYT14Q8NB59 555 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 PXT1Q8NFP0 134 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 OR13C4Q8NGS5 318 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 GNPDA2Q8TDQ7 276 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 CNOT9Q92600 299 aaKnown RBP9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 ESAMQ96AP7 390 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 RAD51AP1Q96B01 352 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 CXorf40BQ96DE9 158 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 HBEGFQ99075 208 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 DDOQ99489 341 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 FAM126AQ9BYI3 521 aaPredicted RBP9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 CPEB1Q9BZB8 566 aaKnown RBP9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 P2RY12Q9H244 342 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 MTG2Q9H4K7 406 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 C1GALT1Q9NS00 363 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 AKAP7Q9P0M2 348 aaPredicted RBP9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 MALT1Q9UDY8 824 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 ZMYM5Q9UJ78 669 aa9.97□□□□□ -0.81
NIF3L1-204ENST00000409357 FBXL21Q9UKT6 434 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms