RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 MMP28Q9H239 520 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 SIRPGQ9P1W8 387 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.17□□□□□ -0.3
AFF3-202ENST00000409236 SLC31A2O15432 143 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 ZNF30P17039 623 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 SHMT1P34896 483 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 F2RL1P55085 397 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 ERVFC1P60507 584 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 DEPDC5O75140 1603 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 H3BMQ9 156 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 GPR39O43194 453 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 TGM5O43548 720 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 THBS1P07996 1170 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 RAB40ALP0C0E4 278 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 TRNP1Q6NT89 227 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 RAB40AQ8WXH6 277 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 TRIB3Q96RU7 358 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 ALG12Q9BV10 488 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 NKX6-2Q9C056 277 aaPredicted RBP13.17□□□□□ -0.3
AFF3-202ENST00000409236 CREBZFQ9NS37 354 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 MANSC4A6NHS7 340 aaPredicted RBP13.17□□□□□ -0.3
AFF3-202ENST00000409236 CSTAP01040 98 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 FABP1P07148 127 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 HGSNATQ68CP4 663 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 BTNL8Q6UX41 500 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 WFIKKN2Q8TEU8 576 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 PURBQ96QR8 312 aaKnown RBP13.17□□□□□ -0.3
AFF3-202ENST00000409236 PCDHGA1Q9Y5H4 931 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 GRXCR1A8MXD5 290 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 TERTO14746 1132 aaKnown RBP13.17□□□□□ -0.3
AFF3-202ENST00000409236 SCO1O75880 301 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 EIF4EP06730 217 aaKnown RBP13.17□□□□□ -0.3
AFF3-202ENST00000409236 OR5H8P0DN80 308 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 DCAF16Q9NXF7 216 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 SLC22A14Q9Y267 594 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 CD163L1Q9NR16 1453 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 ARL2P36404 184 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 PTGIRP43119 386 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 KEAP1Q14145 624 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 KIAA0895LQ68EN5 471 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 ZNF852Q6ZMS4 543 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 WDR20Q8TBZ3 569 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 ZNF317Q96PQ6 595 aaPredicted RBP13.17□□□□□ -0.3
AFF3-202ENST00000409236 CD244Q9BZW8 370 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 HOXD1Q9GZZ0 328 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 CUTCQ9NTM9 273 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 FBXW11Q9UKB1 542 aa13.17□□□□□ -0.3
AFF3-202ENST00000409236 LAMA4Q16363 1823 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 HAS3O00219 553 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 CAMK2BQ13554 666 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 GIMAP1Q8WWP7 306 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 ZBTB8AQ96BR9 441 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 SLC39A9Q9NUM3 307 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.16□□□□□ -0.3
AFF3-202ENST00000409236 CHD3Q12873 2000 aaKnown RBP13.16□□□□□ -0.3
AFF3-202ENST00000409236 HNF1BP35680 557 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 LCN6P62502 163 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 RAP1AP62834 184 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 ABHD12BQ7Z5M8 362 aaPredicted RBP13.16□□□□□ -0.3
AFF3-202ENST00000409236 FJX1Q86VR8 437 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 OR1S2Q8NGQ3 325 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 OR6F1Q8NGZ6 308 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 KIAA1324LA8MWY0 1029 aaPredicted RBP13.16□□□□□ -0.3
AFF3-202ENST00000409236 SOCS2O14508 198 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 GLSO94925 669 aaPredicted RBP13.16□□□□□ -0.3
AFF3-202ENST00000409236 TRHRP34981 398 aaPredicted RBP13.16□□□□□ -0.3
AFF3-202ENST00000409236 UNC5DQ6UXZ4 953 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 NTN4Q9HB63 628 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 NOX3Q9HBY0 568 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 METTL15A6NJ78 407 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 OR1E2P47887 323 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 FAM214AQ32MH5 1076 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 CDONQ4KMG0 1287 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 CILP2Q8IUL8 1156 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 GPR137CQ8N3F9 429 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 RBMXL3Q8N7X1 1067 aaKnown RBP13.16□□□□□ -0.3
AFF3-202ENST00000409236 OR4E2Q8NGC2 313 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 TEPSINQ96N21 525 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 BICRAQ9NZM4 1560 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 FAM159BA6NKW6 160 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 ITGB2P05107 769 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 RNH1P13489 461 aaKnown RBP13.16□□□□□ -0.3
AFF3-202ENST00000409236 ACPPP15309 386 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 BAK1Q16611 211 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 MAMDC2Q7Z304 686 aaPredicted RBP13.16□□□□□ -0.3
AFF3-202ENST00000409236 OR2T11Q8NH01 316 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 ST6GALNAC5Q9BVH7 336 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 C8orf33Q9H7E9 229 aaPredicted RBP13.16□□□□□ -0.3
AFF3-202ENST00000409236 SLC35D1Q9NTN3 355 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 KCNK5O95279 499 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 IGFBP1P08833 259 aaPredicted RBP13.16□□□□□ -0.3
AFF3-202ENST00000409236 DDCP20711 480 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 CHRNEQ04844 493 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 ACER1Q8TDN7 264 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 METTL2AQ96IZ6 378 aaKnown RBP13.16□□□□□ -0.3
AFF3-202ENST00000409236 NKX3-1Q99801 234 aaPredicted RBP13.16□□□□□ -0.3
AFF3-202ENST00000409236 VWDEQ8N2E2 1590 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 SYN1P17600 705 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 M6PRP20645 277 aa13.16□□□□□ -0.3
AFF3-202ENST00000409236 DUSP6Q16828 381 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms