RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 AP3D1O14617 1153 aa23.71■■□□□ 1.39
CPNE1-205ENST00000401607 OR10H3O60404 316 aa23.71■■□□□ 1.39
CPNE1-205ENST00000401607 CLPTM1O96005 669 aa23.71■■□□□ 1.39
CPNE1-205ENST00000401607 ADAP00813 363 aa23.71■■□□□ 1.39
CPNE1-205ENST00000401607 HBQ1P09105 142 aa23.71■■□□□ 1.39
CPNE1-205ENST00000401607 IL11RAQ14626 422 aa23.71■■□□□ 1.39
CPNE1-205ENST00000401607 LAIR1Q6GTX8 287 aa23.71■■□□□ 1.39
CPNE1-205ENST00000401607 KLHL17Q6TDP4 642 aa23.71■■□□□ 1.39
CPNE1-205ENST00000401607 BPHLQ86WA6 291 aaPredicted RBP23.71■■□□□ 1.39
CPNE1-205ENST00000401607 BCORP1Q8N888 145 aa23.71■■□□□ 1.39
CPNE1-205ENST00000401607 AGBL5Q8NDL9 886 aa23.71■■□□□ 1.39
CPNE1-205ENST00000401607 SETD9Q8NE22 299 aa23.71■■□□□ 1.39
CPNE1-205ENST00000401607 OR14A16Q8NHC5 309 aa23.71■■□□□ 1.39
CPNE1-205ENST00000401607 HRASLS5Q96KN8 279 aa23.71■■□□□ 1.39
CPNE1-205ENST00000401607 SLC46A1Q96NT5 459 aa23.71■■□□□ 1.39
CPNE1-205ENST00000401607 NUDT9Q9BW91 350 aa23.71■■□□□ 1.39
CPNE1-205ENST00000401607 MGAT4BQ9UQ53 548 aa23.71■■□□□ 1.39
CPNE1-205ENST00000401607 NPIPB9F8W1W9 429 aa23.7■■□□□ 1.39
CPNE1-205ENST00000401607 CDX4O14627 284 aaPredicted RBP23.7■■□□□ 1.39
CPNE1-205ENST00000401607 PRKNO60260 465 aaPredicted RBP23.7■■□□□ 1.39
CPNE1-205ENST00000401607 CYP7B1O75881 506 aa23.7■■□□□ 1.39
CPNE1-205ENST00000401607 OCA2Q04671 838 aa23.7■■□□□ 1.39
CPNE1-205ENST00000401607 SF3A2Q15428 464 aaKnown RBP23.7■■□□□ 1.39
CPNE1-205ENST00000401607 PDZK1Q5T2W1 519 aa23.7■■□□□ 1.39
CPNE1-205ENST00000401607 OR10H1Q9Y4A9 318 aa23.7■■□□□ 1.39
CPNE1-205ENST00000401607 PCDHGA10Q9Y5H3 936 aa23.7■■□□□ 1.39
CPNE1-205ENST00000401607 HSPE1-MOB4S4R3N1 261 aa23.7■■□□□ 1.39
CPNE1-205ENST00000401607 THY1P04216 161 aa23.7■■□□□ 1.38
CPNE1-205ENST00000401607 PRG2P13727 222 aa23.7■■□□□ 1.38
CPNE1-205ENST00000401607 LSM11P83369 360 aaKnown RBP eCLIP23.7■■□□□ 1.38
CPNE1-205ENST00000401607 IL5RAQ01344 420 aa23.7■■□□□ 1.38
CPNE1-205ENST00000401607 C6orf141Q5SZD1 244 aa23.7■■□□□ 1.38
CPNE1-205ENST00000401607 PLEKHM3Q6ZWE6 761 aa23.7■■□□□ 1.38
CPNE1-205ENST00000401607 ADAMTS16Q8TE57 1224 aa23.7■■□□□ 1.38
CPNE1-205ENST00000401607 HDAC2Q92769 488 aaKnown RBP23.7■■□□□ 1.38
CPNE1-205ENST00000401607 DAZLQ92904 295 aaKnown RBP23.7■■□□□ 1.38
CPNE1-205ENST00000401607 G6PC3Q9BUM1 346 aa23.7■■□□□ 1.38
CPNE1-205ENST00000401607 C14orf105Q9NVL8 296 aa23.7■■□□□ 1.38
CPNE1-205ENST00000401607 ASCC3Q8N3C0 2202 aaKnown RBP23.69■■□□□ 1.38
CPNE1-205ENST00000401607 GKN3PP0CG01 181 aa23.69■■□□□ 1.38
CPNE1-205ENST00000401607 CD59P13987 128 aa23.69■■□□□ 1.38
CPNE1-205ENST00000401607 PPICP45877 212 aa23.69■■□□□ 1.38
CPNE1-205ENST00000401607 LCN10Q6JVE6 187 aa23.69■■□□□ 1.38
CPNE1-205ENST00000401607 OVCH1Q7RTY7 1134 aa23.69■■□□□ 1.38
CPNE1-205ENST00000401607 OR4K5Q8NGD3 323 aa23.69■■□□□ 1.38
CPNE1-205ENST00000401607 LMF1Q96S06 567 aa23.69■■□□□ 1.38
CPNE1-205ENST00000401607 APOL4Q9BPW4 351 aa23.69■■□□□ 1.38
CPNE1-205ENST00000401607 DGCR6LQ9BY27 220 aa23.69■■□□□ 1.38
CPNE1-205ENST00000401607 RXFP3Q9NSD7 469 aa23.69■■□□□ 1.38
CPNE1-205ENST00000401607 PCDHGA6Q9Y5G7 932 aa23.69■■□□□ 1.38
CPNE1-205ENST00000401607 TRIM64CA6NLI5 447 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 POLR1CO15160 346 aaPredicted RBP23.68■■□□□ 1.38
CPNE1-205ENST00000401607 OR5F1O95221 314 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 CCL4P13236 92 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 AGXTP21549 392 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 ST3GAL3Q11203 375 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 CDK5R2Q13319 367 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 TRAM2Q15035 370 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 ZNF141Q15928 474 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 CPEB4Q17RY0 729 aaKnown RBP eCLIP23.68■■□□□ 1.38
CPNE1-205ENST00000401607 FAAH2Q6GMR7 532 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 CNIH3Q8TBE1 160 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 ADIPOR1Q96A54 375 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 ART5Q96L15 291 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 NXF5Q9H1B4 397 aaKnown RBP23.68■■□□□ 1.38
CPNE1-205ENST00000401607 ANKRD19PQ9H560 264 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 REV1Q9UBZ9 1251 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 CFL2Q9Y281 166 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 FRYLO94915 3013 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 A0A087WUU8 490 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 VSTM2BA6NLU5 285 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 CNOT3O75175 753 aaKnown RBP23.68■■□□□ 1.38
CPNE1-205ENST00000401607 HTR2AP28223 471 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 UGT2B15P54855 530 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 RBM48Q5RL73 367 aaKnown RBP23.68■■□□□ 1.38
CPNE1-205ENST00000401607 GDF7Q7Z4P5 450 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 ZER1Q7Z7L7 766 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 RANBP3LQ86VV4 465 aaPredicted RBP23.68■■□□□ 1.38
CPNE1-205ENST00000401607 LINC00471Q8N535 108 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 SLC41A3Q96GZ6 507 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 UCK2Q9BZX2 261 aa23.68■■□□□ 1.38
CPNE1-205ENST00000401607 SYNDIG1LA6NDD5 238 aa23.67■■□□□ 1.38
CPNE1-205ENST00000401607 IDSB3KWA1 339 aa23.67■■□□□ 1.38
CPNE1-205ENST00000401607 NTN1O95631 604 aa23.67■■□□□ 1.38
CPNE1-205ENST00000401607 ZNF28P17035 718 aa23.67■■□□□ 1.38
CPNE1-205ENST00000401607 DRD5P21918 477 aa23.67■■□□□ 1.38
CPNE1-205ENST00000401607 CRHBPP24387 322 aa23.67■■□□□ 1.38
CPNE1-205ENST00000401607 GGT2P36268 569 aa23.67■■□□□ 1.38
CPNE1-205ENST00000401607 RPL5P46777 297 aaKnown RBP23.67■■□□□ 1.38
CPNE1-205ENST00000401607 TUBA4AP68366 448 aa23.67■■□□□ 1.38
CPNE1-205ENST00000401607 MC2RQ01718 297 aa23.67■■□□□ 1.38
CPNE1-205ENST00000401607 C9orf40Q8IXQ3 194 aa23.67■■□□□ 1.38
CPNE1-205ENST00000401607 NLGN4XQ8N0W4 816 aa23.67■■□□□ 1.38
CPNE1-205ENST00000401607 ZNF614Q8N883 585 aa23.67■■□□□ 1.38
CPNE1-205ENST00000401607 OR1N1Q8NGS0 311 aa23.67■■□□□ 1.38
CPNE1-205ENST00000401607 CNOT9Q92600 299 aaKnown RBP23.67■■□□□ 1.38
CPNE1-205ENST00000401607 SLC38A4Q969I6 547 aa23.67■■□□□ 1.38
CPNE1-205ENST00000401607 AASSQ9UDR5 926 aa23.67■■□□□ 1.38
CPNE1-205ENST00000401607 ENOPH1Q9UHY7 261 aa23.67■■□□□ 1.38
CPNE1-205ENST00000401607 FRG2CA6NGY1 282 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms