RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 NCBP2LA6PVI3 153 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 ZNF878C9JN71 531 aa2.58□□□□□ -2
CHD9-202ENST00000398510 H3BMQ9 156 aa2.58□□□□□ -2
CHD9-202ENST00000398510 M0QZQ0 153 aa2.58□□□□□ -2
CHD9-202ENST00000398510 PCDHGA12O60330 932 aa2.58□□□□□ -2
CHD9-202ENST00000398510 PRAF2O60831 178 aa2.58□□□□□ -2
CHD9-202ENST00000398510 HAPLN1P10915 354 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 G6PDP11413 515 aa2.58□□□□□ -2
CHD9-202ENST00000398510 OPRD1P41143 372 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ENTPD1P49961 510 aa2.58□□□□□ -2
CHD9-202ENST00000398510 GYS2P54840 703 aa2.58□□□□□ -2
CHD9-202ENST00000398510 CCL23P55773 120 aa2.58□□□□□ -2
CHD9-202ENST00000398510 SLC7A9P82251 487 aa2.58□□□□□ -2
CHD9-202ENST00000398510 SLC18A2Q05940 514 aa2.58□□□□□ -2
CHD9-202ENST00000398510 MFGE8Q08431 387 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 ZNF181Q2M3W8 571 aa2.58□□□□□ -2
CHD9-202ENST00000398510 UBE2NLQ5JXB2 153 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TMEM69Q5SWH9 247 aa2.58□□□□□ -2
CHD9-202ENST00000398510 GDF6Q6KF10 455 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 GDPGP1Q6ZNW5 385 aa2.58□□□□□ -2
CHD9-202ENST00000398510 NUFIP2Q7Z417 695 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 DEFB123Q8N688 67 aa2.58□□□□□ -2
CHD9-202ENST00000398510 OR7G1Q8NGA0 311 aa2.58□□□□□ -2
CHD9-202ENST00000398510 C17orf50Q8WW18 174 aa2.58□□□□□ -2
CHD9-202ENST00000398510 SLC25A36Q96CQ1 311 aa2.58□□□□□ -2
CHD9-202ENST00000398510 IL4I1Q96RQ9 567 aa2.58□□□□□ -2
CHD9-202ENST00000398510 PECRQ9BY49 303 aa2.58□□□□□ -2
CHD9-202ENST00000398510 FZD8Q9H461 694 aa2.58□□□□□ -2
CHD9-202ENST00000398510 GAR1Q9NY12 217 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 SPHK1Q9NYA1 384 aa2.58□□□□□ -2
CHD9-202ENST00000398510 NDUFAF4Q9P032 175 aa2.58□□□□□ -2
CHD9-202ENST00000398510 COQ4Q9Y3A0 265 aa2.58□□□□□ -2
CHD9-202ENST00000398510 KIAA1549Q9HCM3 1950 aa2.58□□□□□ -2
CHD9-202ENST00000398510 MRPL33O75394 65 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 EEDO75530 441 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 DGKIO75912 1065 aa2.58□□□□□ -2
CHD9-202ENST00000398510 YIF1AO95070 293 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ITGB1P05556 798 aa2.58□□□□□ -2
CHD9-202ENST00000398510 CD48P09326 243 aa2.58□□□□□ -2
CHD9-202ENST00000398510 MSR1P21757 451 aa2.58□□□□□ -2
CHD9-202ENST00000398510 EDNRAP25101 427 aa2.58□□□□□ -2
CHD9-202ENST00000398510 IRAK1P51617 712 aa2.58□□□□□ -2
CHD9-202ENST00000398510 AKR1C2P52895 323 aa2.58□□□□□ -2
CHD9-202ENST00000398510 PLA2G16P53816 162 aa2.58□□□□□ -2
CHD9-202ENST00000398510 HTRA3P83110 453 aa2.58□□□□□ -2
CHD9-202ENST00000398510 FOXK2Q01167 660 aa2.58□□□□□ -2
CHD9-202ENST00000398510 EMX2Q04743 252 aa2.58□□□□□ -2
CHD9-202ENST00000398510 SSBP1Q04837 148 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 PROX2Q3B8N5 592 aa2.58□□□□□ -2
CHD9-202ENST00000398510 FAM76BQ5HYJ3 339 aa2.58□□□□□ -2
CHD9-202ENST00000398510 HENMT1Q5T8I9 393 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 STEAP3Q658P3 488 aa2.58□□□□□ -2
CHD9-202ENST00000398510 XKR5Q6UX68 686 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ANKRD33Q7Z3H0 272 aa2.58□□□□□ -2
CHD9-202ENST00000398510 SATL1Q86VE3 508 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ANKRD46Q86W74 232 aa2.58□□□□□ -2
CHD9-202ENST00000398510 RPS19BP1Q86WX3 136 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 SGPP2Q8IWX5 399 aa2.58□□□□□ -2
CHD9-202ENST00000398510 NPEPL1Q8NDH3 523 aa2.58□□□□□ -2
CHD9-202ENST00000398510 GPR22Q99680 433 aa2.58□□□□□ -2
CHD9-202ENST00000398510 NKX3-1Q99801 234 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 PHF7Q9BWX1 381 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 TWSG1Q9GZX9 223 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TM7SF3Q9NS93 570 aa2.58□□□□□ -2
CHD9-202ENST00000398510 CLEC1BQ9P126 229 aa2.58□□□□□ -2
CHD9-202ENST00000398510 MGAT4CQ9UBM8 478 aa2.58□□□□□ -2
CHD9-202ENST00000398510 IL20RAQ9UHF4 553 aa2.58□□□□□ -2
CHD9-202ENST00000398510 HIF3AQ9Y2N7 669 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ACTL7AQ9Y615 435 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TBX1O43435 398 aa2.58□□□□□ -2
CHD9-202ENST00000398510 AP1G1O43747 822 aa2.58□□□□□ -2
CHD9-202ENST00000398510 SLC43A1O75387 559 aa2.58□□□□□ -2
CHD9-202ENST00000398510 CDC123O75794 336 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 CPNE6O95741 557 aa2.58□□□□□ -2
CHD9-202ENST00000398510 CYBAP13498 195 aa2.58□□□□□ -2
CHD9-202ENST00000398510 CAPN3P20807 821 aa2.58□□□□□ -2
CHD9-202ENST00000398510 EPHA3P29320 983 aa2.58□□□□□ -2
CHD9-202ENST00000398510 PRDX3P30048 256 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 PRLHRP49683 370 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ATP1B3P54709 279 aa2.58□□□□□ -2
CHD9-202ENST00000398510 PSMA6P60900 246 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 SNRPD2P62316 118 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 SPOCK1Q08629 439 aa2.58□□□□□ -2
CHD9-202ENST00000398510 CHAF1BQ13112 559 aa2.58□□□□□ -2
CHD9-202ENST00000398510 C4orf17Q53FE4 359 aa2.58□□□□□ -2
CHD9-202ENST00000398510 SPEM1Q8N4L4 309 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ZNF808Q8N4W9 903 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 CSNK1A1LQ8N752 337 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ZDHHC1Q8WTX9 485 aa2.58□□□□□ -2
CHD9-202ENST00000398510 KCTD12Q96CX2 325 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 ALG8Q9BVK2 526 aa2.58□□□□□ -2
CHD9-202ENST00000398510 RTL8AQ9BWD3 113 aa2.58□□□□□ -2
CHD9-202ENST00000398510 SDCBP2Q9H190 292 aa2.58□□□□□ -2
CHD9-202ENST00000398510 RPF2Q9H7B2 306 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 RNPEPL1Q9HAU8 725 aa2.58□□□□□ -2
CHD9-202ENST00000398510 BCO1Q9HAY6 547 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ZCCHC3Q9NUD5 404 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 LIN7CQ9NUP9 197 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 RHBDL2Q9NX52 303 aa2.58□□□□□ -2
CHD9-202ENST00000398510 B4GALT6Q9UBX8 382 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms