RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 RPS18P62269 152 aaKnown RBP13.83□□□□□ -0.2
CAPN3-207ENST00000397200 IL5RAQ01344 420 aa13.83□□□□□ -0.2
CAPN3-207ENST00000397200 FUT5Q11128 374 aa13.83□□□□□ -0.2
CAPN3-207ENST00000397200 TUBA3CQ13748 450 aa13.83□□□□□ -0.2
CAPN3-207ENST00000397200 MAD2L1BPQ15013 274 aaPredicted RBP13.83□□□□□ -0.2
CAPN3-207ENST00000397200 TGIF1Q15583 401 aa13.83□□□□□ -0.2
CAPN3-207ENST00000397200 EXOC3L2Q2M3D2 409 aa13.83□□□□□ -0.2
CAPN3-207ENST00000397200 GTF2IRD2BQ6EKJ0 949 aa13.83□□□□□ -0.2
CAPN3-207ENST00000397200 LANCL3Q6ZV70 420 aa13.83□□□□□ -0.2
CAPN3-207ENST00000397200 GTF2IRD2Q86UP8 949 aa13.83□□□□□ -0.2
CAPN3-207ENST00000397200 ERI1Q8IV48 349 aaKnown RBP13.83□□□□□ -0.2
CAPN3-207ENST00000397200 LGI4Q8N135 537 aa13.83□□□□□ -0.2
CAPN3-207ENST00000397200 OR9A2Q8NGT5 310 aa13.83□□□□□ -0.2
CAPN3-207ENST00000397200 BBS10Q8TAM1 723 aa13.83□□□□□ -0.2
CAPN3-207ENST00000397200 RAB8BQ92930 207 aa13.83□□□□□ -0.2
CAPN3-207ENST00000397200 ADNPQ9H2P0 1102 aa13.83□□□□□ -0.2
CAPN3-207ENST00000397200 DUSP21Q9H596 190 aa13.83□□□□□ -0.2
CAPN3-207ENST00000397200 GPN2Q9H9Y4 310 aaPredicted RBP13.83□□□□□ -0.2
CAPN3-207ENST00000397200 CXorf21Q9HAI6 301 aa13.83□□□□□ -0.2
CAPN3-207ENST00000397200 PNO1Q9NRX1 252 aaKnown RBP13.83□□□□□ -0.2
CAPN3-207ENST00000397200 PAK1IP1Q9NWT1 392 aaPredicted RBP13.83□□□□□ -0.2
CAPN3-207ENST00000397200 NTMQ9P121 344 aa13.83□□□□□ -0.2
CAPN3-207ENST00000397200 ACAD8Q9UKU7 415 aa13.83□□□□□ -0.2
CAPN3-207ENST00000397200 J3KTA2 159 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 PCDH17O14917 1159 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 ASNA1O43681 348 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 MRPS14O60783 128 aaKnown RBP13.82□□□□□ -0.2
CAPN3-207ENST00000397200 ANGPTL1O95841 491 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 CYP4B1P13584 511 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 TNNI3P19429 210 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 F8A1P23610 371 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 EPHA2P29317 976 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 PTGER1P34995 402 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 TEKQ02763 1124 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 LTB4RQ15722 352 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 TMEM205Q6UW68 189 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 ANKRD37Q7Z713 158 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 CLVS1Q8IUQ0 354 aaPredicted RBP13.82□□□□□ -0.2
CAPN3-207ENST00000397200 PARP8Q8N3A8 854 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 SLC5A8Q8N695 610 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 SGCDQ92629 289 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 MPP4Q96JB8 637 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 MAGED4Q96JG8 741 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 ZNF354BQ96LW1 612 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 ZNF607Q96SK3 696 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 FEVQ99581 238 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 TREX2Q9BQ50 279 aaPredicted RBP13.82□□□□□ -0.2
CAPN3-207ENST00000397200 BTBD2Q9BX70 525 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 ADAP2Q9NPF8 381 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 PCDHGA6Q9Y5G7 932 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 TMEM247A6NEH6 219 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 A8MUA0 341 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 EMC8O43402 210 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 DYRK3O43781 588 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 TRMUO75648 421 aaKnown RBP13.82□□□□□ -0.2
CAPN3-207ENST00000397200 SLITRK5O94991 958 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 OR12D1P0DN82 309 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 MATN1P21941 496 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 PCMT1P22061 227 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 EEF1B2P24534 225 aaKnown RBP13.82□□□□□ -0.2
CAPN3-207ENST00000397200 GALNSP34059 522 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 SLC35A2P78381 396 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 SSPNQ14714 243 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 ELAVL1Q15717 326 aaKnown RBP13.82□□□□□ -0.2
CAPN3-207ENST00000397200 SYPL1Q16563 259 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 ZNF770Q6IQ21 691 aaPredicted RBP13.82□□□□□ -0.2
CAPN3-207ENST00000397200 TMEM107Q6UX40 140 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 GALNT12Q8IXK2 581 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 CNIH3Q8TBE1 160 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 ZNF675Q8TD23 568 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 KAT2AQ92830 837 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 FGF11Q92914 225 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 RIT1Q92963 219 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 MUL1Q969V5 352 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 SIGLEC11Q96RL6 698 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 SH3GLB1Q9Y371 365 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 CLCA3PQ9Y6N3 262 aa13.82□□□□□ -0.2
CAPN3-207ENST00000397200 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 C17orf105B2RV13 164 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 FFAR1O14842 300 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 SLC28A2O43868 658 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 SEMA7AO75326 666 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 GADD45GO95257 159 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 MMP11P24347 488 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 GGT2P36268 569 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 MAN2A2P49641 1150 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 CRISP3P54108 245 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 RPP38P78345 283 aaKnown RBP13.81□□□□□ -0.2
CAPN3-207ENST00000397200 PRR5P85299 388 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 NEDD8Q15843 81 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 PRICKLE4Q2TBC4 344 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 ZNF628Q5EBL2 1059 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 DGAT2L6Q6ZPD8 337 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 CPEB2Q7Z5Q1 589 aaKnown RBP13.81□□□□□ -0.2
CAPN3-207ENST00000397200 OR5D16Q8NGK9 328 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 OR14A16Q8NHC5 309 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 APH1BQ8WW43 257 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 PROX1Q92786 737 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 DAZLQ92904 295 aaKnown RBP13.81□□□□□ -0.2
CAPN3-207ENST00000397200 ELP4Q96EB1 424 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms