RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 SMURF1Q9HCE7 757 aa15.42■□□□□ 0.06
TRIM39-205ENST00000396551 ENTPD2Q9Y5L3 495 aa15.42■□□□□ 0.06
TRIM39-205ENST00000396551 SURF4O15260 269 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 CTSBP07858 339 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 HTR2AP28223 471 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 MTNR1AP48039 350 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 TGM4P49221 684 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 WNT4P56705 351 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 EXOSC7Q15024 291 aaKnown RBP15.41■□□□□ 0.06
TRIM39-205ENST00000396551 PRICKLE4Q2TBC4 344 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 ZNF620Q6ZNG0 422 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 RBM12BQ8IXT5 1001 aaKnown RBP15.41■□□□□ 0.06
TRIM39-205ENST00000396551 CA13Q8N1Q1 262 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 ZNF619Q8N2I2 560 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 MAT2BQ9NZL9 334 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 USP36Q9P275 1121 aaKnown RBP15.41■□□□□ 0.06
TRIM39-205ENST00000396551 IL20RAQ9UHF4 553 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 YARS2Q9Y2Z4 477 aaKnown RBP15.41■□□□□ 0.06
TRIM39-205ENST00000396551 PCDHGB6Q9Y5F9 930 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 GALR3O60755 368 aaPredicted RBP15.41■□□□□ 0.06
TRIM39-205ENST00000396551 MED26O95402 600 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 THBS1P07996 1170 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 NT5EP21589 574 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 RABIFP47224 123 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 CCINQ13939 588 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 AADACL4Q5VUY2 407 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 WDR88Q6ZMY6 472 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 SMRP1Q8NCR6 262 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 MIR1-1HGQ9H1L0 117 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 SP140LQ9H930 580 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 SPIN1Q9Y657 262 aaPredicted RBP15.41■□□□□ 0.06
TRIM39-205ENST00000396551 PEX12O00623 359 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 PLD2O14939 933 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 GPR75O95800 540 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 GKN3PP0CG01 181 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 LIMS3P0CW19 117 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 LIMS4P0CW20 117 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 CDC20Q12834 499 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 OSTF1Q92882 214 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 SNTG1Q9NSN8 517 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 TXNL4BQ9NX01 149 aaKnown RBP15.41■□□□□ 0.06
TRIM39-205ENST00000396551 ZNF229Q9UJW7 825 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 SSR3Q9UNL2 185 aa15.41■□□□□ 0.06
TRIM39-205ENST00000396551 A0A087WV62 115 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 TMEM129A0AVI4 362 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 FAM221BA6H8Z2 402 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 PLOD3O60568 738 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 SLC2A10O95528 541 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 SPNP16150 400 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 MYL12AP19105 171 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 VSX2P58304 361 aaPredicted RBP15.4■□□□□ 0.06
TRIM39-205ENST00000396551 BNC1Q01954 994 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 PGGHGQ32M88 737 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 SLC44A3Q8N4M1 653 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 CSNK1A1LQ8N752 337 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 POC5Q8NA72 575 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 GATAD2BQ8WXI9 593 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 NELL2Q99435 816 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 PNMA8CA0A1B0GUJ8 204 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 PRAMEF26H0Y7S4 382 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 LYPD3O95274 346 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 ZNF24P17028 368 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 TNFSF8P32971 234 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 MAP3K8P41279 467 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 PLAURQ03405 335 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 MRPL2Q5T653 305 aaKnown RBP15.4■□□□□ 0.06
TRIM39-205ENST00000396551 DGAT2L6Q6ZPD8 337 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 BBS1Q8NFJ9 593 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 HTRA1Q92743 480 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 TMEM203Q969S6 136 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 GSDMCQ9BYG8 508 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 FAM60AQ9NP50 221 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 KLHL3Q9UH77 587 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 SF3B6Q9Y3B4 125 aaKnown RBP15.4■□□□□ 0.06
TRIM39-205ENST00000396551 SLCO1B1Q9Y6L6 691 aa15.4■□□□□ 0.06
TRIM39-205ENST00000396551 C2CD4DB7Z1M9 353 aa15.39■□□□□ 0.06
TRIM39-205ENST00000396551 RPS25P62851 125 aaKnown RBP15.39■□□□□ 0.06
TRIM39-205ENST00000396551 EIPR1Q53HC9 387 aa15.39■□□□□ 0.06
TRIM39-205ENST00000396551 FIGNL1Q6PIW4 674 aa15.39■□□□□ 0.06
TRIM39-205ENST00000396551 ZNF485Q8NCK3 441 aa15.39■□□□□ 0.06
TRIM39-205ENST00000396551 OR9Q1Q8NGQ5 310 aa15.39■□□□□ 0.06
TRIM39-205ENST00000396551 ANKRD9Q96BM1 317 aaPredicted RBP15.39■□□□□ 0.06
TRIM39-205ENST00000396551 DUSP22Q9NRW4 184 aa15.39■□□□□ 0.06
TRIM39-205ENST00000396551 ZNF223Q9UK11 482 aaPredicted RBP15.39■□□□□ 0.06
TRIM39-205ENST00000396551 SATB2Q9UPW6 733 aa15.39■□□□□ 0.06
TRIM39-205ENST00000396551 GXYLT2A0PJZ3 443 aa15.39■□□□□ 0.05
TRIM39-205ENST00000396551 SGK494L7N484 410 aa15.39■□□□□ 0.05
TRIM39-205ENST00000396551 STX11O75558 287 aa15.39■□□□□ 0.05
TRIM39-205ENST00000396551 FUT1P19526 365 aa15.39■□□□□ 0.05
TRIM39-205ENST00000396551 CDH11P55287 796 aa15.39■□□□□ 0.05
TRIM39-205ENST00000396551 C1orf61Q13536 156 aa15.39■□□□□ 0.05
TRIM39-205ENST00000396551 DEFB110Q30KQ9 67 aa15.39■□□□□ 0.05
TRIM39-205ENST00000396551 COX18Q8N8Q8 333 aa15.39■□□□□ 0.05
TRIM39-205ENST00000396551 CDRT4Q8N9R6 151 aa15.39■□□□□ 0.05
TRIM39-205ENST00000396551 OR4F15Q8NGB8 312 aa15.39■□□□□ 0.05
TRIM39-205ENST00000396551 ARSGQ96EG1 525 aa15.39■□□□□ 0.05
TRIM39-205ENST00000396551 SAMD8Q96LT4 415 aa15.39■□□□□ 0.05
TRIM39-205ENST00000396551 SLX1AQ9BQ83 275 aa15.39■□□□□ 0.05
TRIM39-205ENST00000396551 CACYBPQ9HB71 228 aaKnown RBP15.39■□□□□ 0.05
TRIM39-205ENST00000396551 CRNNQ9UBG3 495 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms