RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 LINC00471Q8N535 108 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 ZFP41Q8N8Y5 198 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 TMEM104Q8NE00 496 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 CHDHQ8NE62 594 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 PXT1Q8NFP0 134 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 OR10H4Q8NGA5 316 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 CHMP4CQ96CF2 233 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 RNF185Q96GF1 192 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 RCHY1Q96PM5 261 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 NEDD4LQ96PU5 975 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 ALKBH3Q96Q83 286 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 C20orf144Q9BQM9 153 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 PLEKHA1Q9HB21 404 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 TRPV4Q9HBA0 871 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 APMAPQ9HDC9 416 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 C20orf141Q9NUB4 165 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 BLOC1S4Q9NUP1 217 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 ZNF226Q9NYT6 803 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 HACD3Q9P035 362 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 SLC12A6Q9UHW9 1150 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 DBNLQ9UJU6 430 aaKnown RBP-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 RPS6KA6Q9UK32 745 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 JPT1Q9UK76 154 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 FZR1Q9UM11 496 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 UBQLN1Q9UMX0 589 aaKnown RBP-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 A4GNTQ9UNA3 340 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 OR10H1Q9Y4A9 318 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 TSSC4Q9Y5U2 329 aaPredicted RBP-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 SLC25A15Q9Y619 301 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 POMT1Q9Y6A1 747 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 SCINQ9Y6U3 715 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 SHROOM4Q9ULL8 1493 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 PLXNA2O75051 1894 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 EML5Q05BV3 1969 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 GREB1Q4ZG55 1949 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 FHOD3Q2V2M9 1422 aa-1.4□□□□□ -2.63
RNU6-540P-201ENST00000384622 FYCO1Q9BQS8 1478 aa-1.41□□□□□ -2.63
RNU6-540P-201ENST00000384622 PLEKHG1Q9ULL1 1385 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 IGHV1OR15-9A0A0B4J2B8 117 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 TMEM221A6NGB7 291 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 FAM90A12PA8MX19 464 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 NPIPA2E9PIF3 369 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 FBP2O00757 339 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 TRDMT1O14717 391 aaKnown RBP-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 SLC24A1O60721 1099 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 ERLIN2O94905 339 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 PGLSO95336 258 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 ADCY5O95622 1261 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 IFNA14P01570 189 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 PRM2P04554 102 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 ATP1B1P05026 303 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 CD55P08174 381 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 PLEKP08567 350 aaPredicted RBP-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 U2AF1L5P0DN76 240 aaPredicted RBP-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 P4HA1P13674 534 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 IGHV1-2P23083 117 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 ACAT1P24752 427 aaKnown RBP-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 ACADLP28330 430 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 IL2RGP31785 369 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 OPRM1P35372 400 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 HADHAP40939 763 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 XCR1P46094 333 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 MCM2P49736 904 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 XKP51811 444 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 ZNF137PP52743 207 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 RPS23P62266 143 aaKnown RBP-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 IGBP1P78318 339 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 ASIC1P78348 528 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 MYBPC1Q00872 1141 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 U2AF1Q01081 240 aaKnown RBP eCLIP-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 CHAF1BQ13112 559 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 MAMLD1Q13495 774 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 VGLL4Q14135 290 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 SLC10A1Q14973 349 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 NSDHLQ15738 373 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 FAM106AQ4KMX7 169 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 SULT1C3Q6IMI6 304 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 PRR5LQ6MZQ0 368 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 TMEM205Q6UW68 189 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 C16orf54Q6UWD8 224 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 CLPSL2Q6UWE3 100 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 SBSNQ6UWP8 590 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 ZNF620Q6ZNG0 422 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 GALNT5Q7Z7M9 940 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 GPBP1Q86WP2 473 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 CADM2Q8N3J6 435 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 PLD5Q8N7P1 536 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 OR5B17Q8NGF7 314 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 OR51T1Q8NGJ9 327 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 GPR119Q8TDV5 335 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 CCDC107Q8WV48 283 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 DYNLL2Q96FJ2 89 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 SPATA13Q96N96 652 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 IP6K3Q96PC2 410 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 BAG1Q99933 345 aaPredicted RBP-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 NAA38Q9BRA0 125 aaKnown RBP-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 TMEM70Q9BUB7 260 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 FUT8Q9BYC5 575 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 MROH8Q9H579 483 aa-1.41□□□□□ -2.64
RNU6-540P-201ENST00000384622 EPB41L5Q9HCM4 733 aa-1.41□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms