RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 LHX2P50458 406 aa15.26■□□□□ 0.03
HMGN4-201ENST00000377575 SLC18A1P54219 525 aa15.26■□□□□ 0.03
HMGN4-201ENST00000377575 DIO3P55073 304 aa15.26■□□□□ 0.03
HMGN4-201ENST00000377575 POU6F2P78424 691 aaPredicted RBP15.26■□□□□ 0.03
HMGN4-201ENST00000377575 C17orf67Q0P5P2 114 aa15.26■□□□□ 0.03
HMGN4-201ENST00000377575 TP53BP2Q13625 1128 aa15.26■□□□□ 0.03
HMGN4-201ENST00000377575 LASP1Q14847 261 aaKnown RBP15.26■□□□□ 0.03
HMGN4-201ENST00000377575 DUSP5Q16690 384 aa15.26■□□□□ 0.03
HMGN4-201ENST00000377575 BEND6Q5SZJ8 279 aaPredicted RBP15.26■□□□□ 0.03
HMGN4-201ENST00000377575 RAET1LQ5VY80 246 aa15.26■□□□□ 0.03
HMGN4-201ENST00000377575 BHLHB9Q6PI77 547 aa15.26■□□□□ 0.03
HMGN4-201ENST00000377575 MARCH3Q86UD3 253 aa15.26■□□□□ 0.03
HMGN4-201ENST00000377575 MBD3L2Q8NHZ7 208 aaPredicted RBP15.26■□□□□ 0.03
HMGN4-201ENST00000377575 C14orf79Q96F83 325 aa15.26■□□□□ 0.03
HMGN4-201ENST00000377575 LRRC46Q96FV0 321 aa15.26■□□□□ 0.03
HMGN4-201ENST00000377575 YIPF4Q9BSR8 244 aa15.26■□□□□ 0.03
HMGN4-201ENST00000377575 BTBD2Q9BX70 525 aa15.26■□□□□ 0.03
HMGN4-201ENST00000377575 NUF2Q9BZD4 464 aa15.26■□□□□ 0.03
HMGN4-201ENST00000377575 DUSP22Q9NRW4 184 aa15.26■□□□□ 0.03
HMGN4-201ENST00000377575 GIN1Q9NXP7 522 aa15.26■□□□□ 0.03
HMGN4-201ENST00000377575 NKIRAS1Q9NYS0 192 aa15.26■□□□□ 0.03
HMGN4-201ENST00000377575 FAF1Q9UNN5 650 aaPredicted RBP15.26■□□□□ 0.03
HMGN4-201ENST00000377575 RPH3AQ9Y2J0 694 aaPredicted RBP15.26■□□□□ 0.03
HMGN4-201ENST00000377575 FBN2P35556 2912 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 C17orf51A8MQB3 221 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 KDM4EB2RXH2 506 aaPredicted RBP15.25■□□□□ 0.03
HMGN4-201ENST00000377575 ZIC3O60481 467 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 SOX30O94993 753 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 ANGPTL1O95841 491 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 HPGDP15428 266 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 HK1P19367 917 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 BMP5P22003 454 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 TCEA1P23193 301 aaKnown RBP15.25■□□□□ 0.03
HMGN4-201ENST00000377575 SOAT1P35610 550 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 CCT3P49368 545 aaKnown RBP15.25■□□□□ 0.03
HMGN4-201ENST00000377575 MAGOHP61326 146 aaKnown RBP15.25■□□□□ 0.03
HMGN4-201ENST00000377575 SRYQ05066 204 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 PGS1Q32NB8 556 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 EXOSC6Q5RKV6 272 aaKnown RBP15.25■□□□□ 0.03
HMGN4-201ENST00000377575 CDC73Q6P1J9 531 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 FIGNL1Q6PIW4 674 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 LIX1LQ8IVB5 337 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 DMRTC2Q8IXT2 367 aaPredicted RBP15.25■□□□□ 0.03
HMGN4-201ENST00000377575 NAXEQ8NCW5 288 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 RAB3IL1Q8TBN0 382 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 MGARPQ8TDB4 240 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 DUSP19Q8WTR2 217 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 C16orf58Q96GQ5 468 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 ZFP3Q96NJ6 502 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 TUBA1CQ9BQE3 449 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 ACTRT3Q9BYD9 372 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 DPY30Q9C005 99 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 CXorf36Q9H7Y0 433 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 MEAF6Q9HAF1 191 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 MED11Q9P086 117 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 ZNF629Q9UEG4 869 aaPredicted RBP15.25■□□□□ 0.03
HMGN4-201ENST00000377575 PCNX3Q9H6A9 2034 aa15.25■□□□□ 0.03
HMGN4-201ENST00000377575 IGLV3-32A0A0A0MS00 114 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 B4DXG7 233 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 ALG1L2C9J202 215 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 LINC01387J3KSC0 135 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 NDUFB5O43674 189 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 OXSR1O95747 527 aaPredicted RBP15.24■□□□□ 0.03
HMGN4-201ENST00000377575 ZNF708P17019 499 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 LBPP18428 481 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 TBXA2RP21731 343 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 PEX19P40855 299 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 ASCL1P50553 236 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 WNT3P56703 355 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 CLDN18P56856 261 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 WDR4P57081 412 aaKnown RBP15.24■□□□□ 0.03
HMGN4-201ENST00000377575 ATG16L1Q676U5 607 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 GALNT10Q86SR1 603 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 MISPQ8IVT2 679 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 ZNF295-AS1Q8N0V1 137 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 GOT1L1Q8NHS2 421 aaPredicted RBP15.24■□□□□ 0.03
HMGN4-201ENST00000377575 FAM110BQ8TC76 370 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 ADAMTS15Q8TE58 950 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 CDS1Q92903 461 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 TLCD1Q96CP7 247 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 C1GALT1C1Q96EU7 318 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 OTUB1Q96FW1 271 aaPredicted RBP15.24■□□□□ 0.03
HMGN4-201ENST00000377575 TM9SF2Q99805 663 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 PIGQQ9BRB3 760 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 RTN4RQ9BZR6 473 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 PIGUQ9H490 435 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 TMBIM4Q9HC24 238 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 UBQLN4Q9NRR5 601 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 THAP1Q9NVV9 213 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 CSMD1Q96PZ7 3565 aa15.24■□□□□ 0.03
HMGN4-201ENST00000377575 CREBBPQ92793 2442 aa15.23■□□□□ 0.03
HMGN4-201ENST00000377575 CLCA1A8K7I4 914 aa15.23■□□□□ 0.03
HMGN4-201ENST00000377575 RNASET2O00584 256 aaKnown RBP15.23■□□□□ 0.03
HMGN4-201ENST00000377575 SCDO00767 359 aa15.23■□□□□ 0.03
HMGN4-201ENST00000377575 PEPDP12955 493 aa15.23■□□□□ 0.03
HMGN4-201ENST00000377575 POU3F2P20265 443 aaPredicted RBP15.23■□□□□ 0.03
HMGN4-201ENST00000377575 ATP6V1C1P21283 382 aa15.23■□□□□ 0.03
HMGN4-201ENST00000377575 CTSSP25774 331 aa15.23■□□□□ 0.03
HMGN4-201ENST00000377575 OPRM1P35372 400 aa15.23■□□□□ 0.03
HMGN4-201ENST00000377575 STARP49675 285 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms