RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 KCNE3Q9Y6H6 103 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 A0A0A6YYD5 115 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 H7BY64 318 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 ERGP11308 486 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 SYN1P17600 705 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 OR10A3P58181 314 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 SNTA1Q13424 505 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 DECR1Q16698 335 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 OR4C11Q6IEV9 310 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 CDC73Q6P1J9 531 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 ADGRD2Q7Z7M1 963 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 SLC51BQ86UW2 128 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 CPOQ8IVL8 374 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 ACBD7Q8N6N7 88 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 OR2T33Q8NG76 320 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 IRF7Q92985 503 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 LRIG1Q96JA1 1093 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 ZNF514Q96K75 400 aaPredicted RBP19.76■□□□□ 0.75
UPF3A-202ENST00000375299 PRAP1Q96NZ9 151 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 DPCDQ9BVM2 203 aaPredicted RBP19.76■□□□□ 0.75
UPF3A-202ENST00000375299 IL20RAQ9UHF4 553 aa19.76■□□□□ 0.75
UPF3A-202ENST00000375299 KLF4O43474 513 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 TGM5O43548 720 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 PRKRAO75569 313 aaKnown RBP19.75■□□□□ 0.75
UPF3A-202ENST00000375299 LRG1P02750 347 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 HMGN1P05114 100 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 ALPPL2P10696 532 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 ZNF250P15622 560 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 PAICSP22234 425 aaKnown RBP19.75■□□□□ 0.75
UPF3A-202ENST00000375299 F8A1P23610 371 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 PSMB5P28074 263 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 HSF2Q03933 536 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 RPA4Q13156 261 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 FGFBP1Q14512 234 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 HSD17B12Q53GQ0 312 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 CLLU1Q5K131 121 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 BHLHB9Q6PI77 547 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 ZNF366Q8N895 744 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 OR6C4Q8NGE1 309 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 TRMT10AQ8TBZ6 339 aaKnown RBP19.75■□□□□ 0.75
UPF3A-202ENST00000375299 VWCEQ96DN2 955 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 NUS1Q96E22 293 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 LAMA2P24043 3122 aaKnown RBP19.75■□□□□ 0.75
UPF3A-202ENST00000375299 TCF20Q9UGU0 1960 aaKnown RBP19.75■□□□□ 0.75
UPF3A-202ENST00000375299 LOC105369274A0A096LPK9 316 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 CARNS1A5YM72 827 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 FAM183AA6NL82 134 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 PIP5K1CO60331 668 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 GNRH1P01148 92 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 IFNA7P01567 189 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 EXOSC2Q13868 293 aaKnown RBP19.75■□□□□ 0.75
UPF3A-202ENST00000375299 LGALSLQ3ZCW2 172 aaPredicted RBP19.75■□□□□ 0.75
UPF3A-202ENST00000375299 FAM46CQ5VWP2 391 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 C11orf96Q7Z7L8 435 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 GID4Q8IVV7 300 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 NRMQ8IXM6 262 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 OR4N4Q8N0Y3 316 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 TOMM5Q8N4H5 51 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 C16orf58Q96GQ5 468 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 CLEC4MQ9H2X3 399 aaPredicted RBP19.75■□□□□ 0.75
UPF3A-202ENST00000375299 ENTPD4Q9Y227 616 aa19.75■□□□□ 0.75
UPF3A-202ENST00000375299 A0A1B0GVI7 797 aa19.74■□□□□ 0.75
UPF3A-202ENST00000375299 CIB4A0PJX0 185 aa19.74■□□□□ 0.75
UPF3A-202ENST00000375299 GSAPA4D1B5 854 aa19.74■□□□□ 0.75
UPF3A-202ENST00000375299 OR1F1O43749 312 aa19.74■□□□□ 0.75
UPF3A-202ENST00000375299 LILRB3O75022 631 aa19.74■□□□□ 0.75
UPF3A-202ENST00000375299 FZD7O75084 574 aa19.74■□□□□ 0.75
UPF3A-202ENST00000375299 SSR2P43308 183 aa19.74■□□□□ 0.75
UPF3A-202ENST00000375299 FAM27D1Q5T7N8 215 aa19.74■□□□□ 0.75
UPF3A-202ENST00000375299 CNKSR3Q6P9H4 555 aa19.74■□□□□ 0.75
UPF3A-202ENST00000375299 HDDC2Q7Z4H3 204 aa19.74■□□□□ 0.75
UPF3A-202ENST00000375299 OR8K5Q8NH50 307 aa19.74■□□□□ 0.75
UPF3A-202ENST00000375299 TIMP4Q99727 224 aa19.74■□□□□ 0.75
UPF3A-202ENST00000375299 C17orf62Q9BQA9 187 aa19.74■□□□□ 0.75
UPF3A-202ENST00000375299 SLC38A1Q9H2H9 487 aa19.74■□□□□ 0.75
UPF3A-202ENST00000375299 TRIM36Q9NQ86 728 aa19.74■□□□□ 0.75
UPF3A-202ENST00000375299 PRKAG2Q9UGJ0 569 aa19.74■□□□□ 0.75
UPF3A-202ENST00000375299 GPR34Q9UPC5 381 aa19.74■□□□□ 0.75
UPF3A-202ENST00000375299 CHST2Q9Y4C5 530 aa19.74■□□□□ 0.75
UPF3A-202ENST00000375299 MEIKINA0A087WXM9 373 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 A0A0G2JK05 382 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 CDK2AP1O14519 115 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 PPM1DO15297 605 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 SPINT1O43278 529 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 SYPP08247 313 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 NDUFV2P19404 249 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 GIFP27352 417 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 CLCNKAP51800 687 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 TAGLNQ01995 201 aaKnown RBP19.73■□□□□ 0.75
UPF3A-202ENST00000375299 GRK1Q15835 563 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 AANATQ16613 207 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 PLEKHM3Q6ZWE6 761 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 TPRA1Q86W33 373 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 GPALPP1Q8IXQ4 340 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 BMPERQ8N8U9 685 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.73■□□□□ 0.75
UPF3A-202ENST00000375299 OR5W2Q8NH69 310 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 ADAMTS14Q8WXS8 1223 aa19.73■□□□□ 0.75
UPF3A-202ENST00000375299 AHCYL2Q96HN2 611 aaKnown RBP19.73■□□□□ 0.75
UPF3A-202ENST00000375299 SAMD8Q96LT4 415 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms