RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 OR2T27Q8NH04 317 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 MAL2Q969L2 176 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 TMIGD2Q96BF3 282 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 UPRTQ96BW1 309 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 CLIP3Q96DZ5 547 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 IKZF4Q9H2S9 585 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 MAP10Q9P2G4 905 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 hCG_1807616A0A1W2PRN6 198 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 GABARAPH6UMI1 98 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 PFKMP08237 780 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 CNR1P21554 472 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 OR1E2P47887 323 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 TAS2R30P59541 319 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 OR5L2Q8NGL0 311 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 TSPAN10Q9H1Z9 355 aaPredicted RBP9.64□□□□□ -0.87
PTCH1-204ENST00000375290 PGAP2Q9UHJ9 254 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 TVP23AA6NH52 213 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 CSTAP01040 98 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 SPI1P17947 270 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 DYRK1AQ13627 763 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 UPP1Q16831 310 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 CATSPEREQ5SY80 951 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 B3GNT9Q6UX72 402 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 CMIPQ8IY22 773 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 OR6N2Q8NGY6 317 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 CNTNAP3Q9BZ76 1288 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 TCEAL2Q9H3H9 227 aaPredicted RBP9.64□□□□□ -0.87
PTCH1-204ENST00000375290 C1GALT1Q9NS00 363 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 CBY1Q9Y3M2 126 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 D6RAR5 112 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 DIRAS1O95057 198 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 HOXA9P31269 272 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 CCR7P32248 378 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 SCAND1P57086 179 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 RBMS3Q6XE24 437 aaKnown RBP9.64□□□□□ -0.87
PTCH1-204ENST00000375290 ZDHHC1Q8WTX9 485 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 SLC38A3Q99624 504 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 VAPAQ9P0L0 249 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 CLDN7O95471 211 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 GAAP10253 952 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 SLC35D3Q5M8T2 416 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 HFE2Q6ZVN8 426 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 ASPGQ86U10 573 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 NIPSNAP3BQ9BS92 247 aa9.64□□□□□ -0.87
PTCH1-204ENST00000375290 FTCDNL1E5RQL4 147 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 CLEC3AO75596 197 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 SFTPBP07988 381 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 NR0B1P51843 470 aaKnown RBP9.63□□□□□ -0.87
PTCH1-204ENST00000375290 TBPL1P62380 186 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 MFGE8Q08431 387 aaPredicted RBP9.63□□□□□ -0.87
PTCH1-204ENST00000375290 SKA3Q8IX90 412 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 COMMD1Q8N668 190 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 OR5M3Q8NGP4 307 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 OR13C3Q8NGS6 347 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 SLC6A7Q99884 636 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 USP54Q70EL1 1684 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 LAS2Q8IYD9 372 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 GABARAPL3Q9BY60 117 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 CXorf51AA0A1B0GTR3 108 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 NUDT21O43809 227 aaKnown RBP9.63□□□□□ -0.87
PTCH1-204ENST00000375290 ADRB1P08588 477 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 EDNRBP24530 442 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 ERVPABLB-1P60509 514 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 SLC35A2P78381 396 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 MEF2AQ02078 507 aaPredicted RBP9.63□□□□□ -0.87
PTCH1-204ENST00000375290 CLPPQ16740 277 aaPredicted RBP9.63□□□□□ -0.87
PTCH1-204ENST00000375290 INAVAQ3KP66 663 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 FBXO48Q5FWF7 155 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 PRAMEF18Q5VWM3 479 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 CD200R1Q8TD46 325 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 ATOH8Q96SQ7 321 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 CPEB1Q9BZB8 566 aaKnown RBP9.63□□□□□ -0.87
PTCH1-204ENST00000375290 GLIS2Q9BZE0 524 aaPredicted RBP9.63□□□□□ -0.87
PTCH1-204ENST00000375290 LOC100509620A0A075B734 347 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 POP7O75817 140 aaKnown RBP9.63□□□□□ -0.87
PTCH1-204ENST00000375290 OR12D1P0DN82 309 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 PBX2P40425 430 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 PAPD4Q6PIY7 484 aaKnown RBP9.63□□□□□ -0.87
PTCH1-204ENST00000375290 IL17RCQ8NAC3 791 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 GPR26Q8NDV2 337 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 OR52B6Q8NGF0 335 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 FRS2Q8WU20 508 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 DCUN1D4Q92564 292 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 RRNAD1Q96FB5 475 aaKnown RBP9.63□□□□□ -0.87
PTCH1-204ENST00000375290 LRIT2A6NDA9 550 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 CACNG3O60359 315 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 MZT1Q08AG7 82 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 SERTAD2Q14140 314 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 TREML2Q5T2D2 321 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 COMMD6Q7Z4G1 85 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 CASTOR1Q8WTX7 329 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 GIMAP1Q8WWP7 306 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 LMLNQ96KR4 655 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 LYSMD1Q96S90 227 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 NICN1Q9BSH3 213 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 ARAP2Q8WZ64 1704 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 CD8B2A6NJW9 211 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 ANHXE9PGG2 379 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 BLOC1S5-TXNDC5H3BN57 136 aa9.63□□□□□ -0.87
PTCH1-204ENST00000375290 CD8BP10966 210 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 233.3 ms