RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 OR4M2Q8NGB6 313 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 CREB3L4Q8TEY5 395 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 NUDT8Q8WV74 236 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 SNX18Q96RF0 628 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 CLSTN3Q9BQT9 956 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 TNFRSF12AQ9NP84 129 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 KLHL21Q9UJP4 597 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 PADI2Q9Y2J8 665 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 A3GALT2U3KPV4 340 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 OR52A4PA6NMU1 304 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 AMY2AP04746 511 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 IMPA1P29218 277 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 HLA-FP30511 346 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 PRSS3P35030 304 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 EIF2DP41214 584 aaKnown RBP10.87□□□□□ -0.67
PTCH1-203ENST00000375274 DDX60Q8IY21 1712 aaKnown RBP10.87□□□□□ -0.67
PTCH1-203ENST00000375274 ZNF440Q8IYI8 595 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 CADM3Q8N126 398 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 DNAJC5GQ8N7S2 189 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 MS4A4AQ96JQ5 239 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 POT1Q9NUX5 634 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 CXXC1Q9P0U4 656 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-203ENST00000375274 USP36Q9P275 1121 aaKnown RBP10.87□□□□□ -0.67
PTCH1-203ENST00000375274 NAP1L6A6NFF2 107 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 GFRA2O00451 464 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 PLATP00750 562 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 SFTPBP07988 381 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 CTSAP10619 480 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 TIMP2P16035 220 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 GIFP27352 417 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 GLP1RP43220 463 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 PGGHGQ32M88 737 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 EOGTQ5NDL2 527 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 PIP5KL1Q5T9C9 394 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 LRRC56Q8IYG6 542 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-203ENST00000375274 CELF2-AS1Q8N7Q2 184 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 RASGEF1AQ8N9B8 481 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 OR5AK2Q8NH90 309 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 SLC38A5Q8WUX1 472 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 KLHDC7BQ96G42 594 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 SLC17A9Q9BYT1 436 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 MKRN2Q9H000 416 aaKnown RBP10.87□□□□□ -0.67
PTCH1-203ENST00000375274 SYNPO2LQ9H987 977 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 FZD3Q9NPG1 666 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 LRP5O75197 1615 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 KIAA0100Q14667 2235 aaKnown RBP10.87□□□□□ -0.67
PTCH1-203ENST00000375274 MYH14Q7Z406 1995 aaKnown RBP10.87□□□□□ -0.67
PTCH1-203ENST00000375274 WASH3PC4AMC7 463 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 SCO2O43819 266 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 SC5DO75845 299 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 CPNE6O95741 557 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 S100A2P29034 98 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 GDI2P50395 445 aaKnown RBP10.87□□□□□ -0.67
PTCH1-203ENST00000375274 C6orf132Q5T0Z8 1188 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 ELP2Q6IA86 826 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 FAM83HQ6ZRV2 1179 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-203ENST00000375274 PARS2Q7L3T8 475 aaKnown RBP10.87□□□□□ -0.67
PTCH1-203ENST00000375274 ZNF283Q8N7M2 679 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 SMARCD2Q92925 531 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 TRMT2BQ96GJ1 504 aaKnown RBP10.87□□□□□ -0.67
PTCH1-203ENST00000375274 RAD9AQ99638 391 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 NIPSNAP1Q9BPW8 284 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 MACROD1Q9BQ69 325 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 RTP3Q9BQQ7 232 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 C1QTNF2Q9BXJ5 285 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 METTL7AQ9H8H3 244 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 ACSS1Q9NUB1 689 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-203ENST00000375274 STRCP1A6NGW2 1772 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 FOXE1O00358 373 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-203ENST00000375274 TAPBPO15533 448 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 KCNJ13O60928 360 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 SCG5P05408 212 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 RPL34P49207 117 aaKnown RBP10.86□□□□□ -0.67
PTCH1-203ENST00000375274 ILKQ13418 452 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 OXA1LQ15070 435 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 PCGF3Q3KNV8 242 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 PLEKHN1Q494U1 663 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-203ENST00000375274 SPIN3Q5JUX0 258 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 RFLNAQ6ZTI6 216 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 GPAT4Q86UL3 456 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 LMNTD1Q8N9Z9 388 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 BPIFA2Q96DR5 249 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 URM1Q9BTM9 101 aaKnown RBP10.86□□□□□ -0.67
PTCH1-203ENST00000375274 RBFOX1Q9NWB1 397 aaKnown RBP10.86□□□□□ -0.67
PTCH1-203ENST00000375274 NDUFAF4Q9P032 175 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 SERTAD3Q9UJW9 196 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 ERVK-19Q9WJR5 959 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 KCNIP3Q9Y2W7 256 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 OR2A25A4D2G3 310 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 ARPC1BO15143 372 aaKnown RBP10.86□□□□□ -0.67
PTCH1-203ENST00000375274 SLC22A5O76082 557 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 SBK3P0C264 359 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 ACPPP15309 386 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 HIST1H1TP22492 207 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-203ENST00000375274 ACVR1Q04771 509 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 DSC1Q08554 894 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 MGAT3Q09327 533 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 C1orf61Q13536 156 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 UBXN2BQ14CS0 331 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 RAB11BQ15907 218 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms