RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 A6NIZ1 184 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 DISC1C4P0D8 188 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 LCATP04180 440 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 MMP2P08253 660 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 STSP08842 583 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 GPX3P22352 226 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 RAP1BP61224 184 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 RAP1AP62834 184 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 SLC37A2Q8TED4 501 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 UBXN10Q96LJ8 280 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 FER1L6-AS2Q96M78 137 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 MGLLQ99685 303 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 UTP23Q9BRU9 249 aaKnown RBP13.85□□□□□ -0.19
NDC1-201ENST00000371429 EMCNQ9ULC0 261 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 MYH15Q9Y2K3 1946 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 TRIM64A6NGJ6 449 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 H0YIV9 168 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 PVALBP20472 110 aaPredicted RBP13.85□□□□□ -0.19
NDC1-201ENST00000371429 RBM34P42696 430 aaKnown RBP13.85□□□□□ -0.19
NDC1-201ENST00000371429 ZMYND11Q15326 602 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 ATAD3CQ5T2N8 411 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 FOXRED2Q8IWF2 684 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 CYB561A3Q8NBI2 242 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 C3orf30Q96M34 536 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 LMF2Q9BU23 707 aaKnown RBP13.85□□□□□ -0.19
NDC1-201ENST00000371429 DPAGT1Q9H3H5 408 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 NMNAT1Q9HAN9 279 aaPredicted RBP13.85□□□□□ -0.19
NDC1-201ENST00000371429 ENY2Q9NPA8 101 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 NUFIP1Q9UHK0 495 aaKnown RBP13.85□□□□□ -0.19
NDC1-201ENST00000371429 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.84□□□□□ -0.19
NDC1-201ENST00000371429 GRXCR2A6NFK2 248 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 CNR2P34972 360 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 IST1P53990 364 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 OR1D5P58170 312 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 DMWDQ09019 674 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 BCL7AQ4VC05 210 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 SYT14Q8NB59 555 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 GATAD2BQ8WXI9 593 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 OR7D2Q96RA2 312 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 ZNF300Q96RE9 604 aaPredicted RBP13.84□□□□□ -0.19
NDC1-201ENST00000371429 ENAMQ9NRM1 1142 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 FAM118AQ9NWS6 357 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 ERVK-18Q9QC07 812 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 H0Y8X5 98 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 E2F3O00716 465 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 ZDHHC11BP0C7U3 371 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 GABRB3P28472 473 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 MAGEA8P43361 318 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 HOXC5Q00444 222 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 BCL2L15Q5TBC7 163 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 XKR5Q6UX68 686 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 SERPINA11Q86U17 422 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 SPTSSAQ969W0 71 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 ARL5BQ96KC2 179 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 WACQ9BTA9 647 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 SLC5A7Q9GZV3 580 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 PCDHGA7Q9Y5G6 932 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 GPR45Q9Y5Y3 372 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 LHCGRP22888 699 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 CEBPGP53567 150 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 SNU13P55769 128 aaKnown RBP13.84□□□□□ -0.19
NDC1-201ENST00000371429 GPLD1P80108 840 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 TNFRSF17Q02223 184 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 MLC1Q15049 377 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 CNPY1Q3B7I2 92 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 PAPD4Q6PIY7 484 aaKnown RBP13.84□□□□□ -0.19
NDC1-201ENST00000371429 SLCO4C1Q6ZQN7 724 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 LILRA3Q8N6C8 439 aaPredicted RBP13.84□□□□□ -0.19
NDC1-201ENST00000371429 IQCF1Q8N6M8 205 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 SH2B3Q9UQQ2 575 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 PLEKHM1Q9Y4G2 1056 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 ANKRD12Q6UB98 2062 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 FAM171A2A8MVW0 826 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 C2CD4DB7Z1M9 353 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 H3BUI4 141 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 SCGB1D2O95969 90 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 GLULP15104 373 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 EIF5AP63241 154 aaKnown RBP13.84□□□□□ -0.19
NDC1-201ENST00000371429 RUNDC3AQ59EK9 446 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 AFMIDQ63HM1 303 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 ZNF740Q8NDX6 193 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 WBP2Q969T9 261 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 ATG5Q9H1Y0 275 aa13.84□□□□□ -0.19
NDC1-201ENST00000371429 N4BP2Q86UW6 1770 aaPredicted RBP13.84□□□□□ -0.19
NDC1-201ENST00000371429 ARNTLO00327 626 aa13.83□□□□□ -0.19
NDC1-201ENST00000371429 MT-ND2P03891 347 aa13.83□□□□□ -0.19
NDC1-201ENST00000371429 DCTP40126 519 aa13.83□□□□□ -0.19
NDC1-201ENST00000371429 NKX3-2P78367 333 aa13.83□□□□□ -0.19
NDC1-201ENST00000371429 ABHD12BQ7Z5M8 362 aaPredicted RBP13.83□□□□□ -0.19
NDC1-201ENST00000371429 SPEM1Q8N4L4 309 aa13.83□□□□□ -0.19
NDC1-201ENST00000371429 OR9Q2Q8NGE9 314 aa13.83□□□□□ -0.19
NDC1-201ENST00000371429 ZFPM2Q8WW38 1151 aa13.83□□□□□ -0.19
NDC1-201ENST00000371429 TWSG1Q9GZX9 223 aa13.83□□□□□ -0.19
NDC1-201ENST00000371429 CAMK2AQ9UQM7 478 aa13.83□□□□□ -0.19
NDC1-201ENST00000371429 IER3IP1Q9Y5U9 82 aa13.83□□□□□ -0.19
NDC1-201ENST00000371429 TMEM202A6NGA9 273 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 PLOD2O00469 737 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 ITGB8P26012 769 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 MAP2K4P45985 399 aa13.83□□□□□ -0.2
NDC1-201ENST00000371429 PGFP49763 221 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms